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Panzer_STK_ModelEvaluatorFactory.hpp
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42 
43 #ifndef PANZER_STK_MODEL_EVALUATOR_FACTORY_HPP
44 #define PANZER_STK_MODEL_EVALUATOR_FACTORY_HPP
45 
46 #include <iostream>
47 #include <string>
48 #include <map>
49 
50 #include "Teuchos_RCP.hpp"
51 #include "Teuchos_Ptr.hpp"
52 #include "Teuchos_Comm.hpp"
55 #include "Teuchos_ParameterListAcceptorDefaultBase.hpp"
56 
57 #include "PanzerAdaptersSTK_config.hpp"
58 #include "Panzer_PhysicsBlock.hpp"
60 #include "Panzer_STK_Interface.hpp"
67 
68 #include "Panzer_NodeType.hpp"
69 
70 #ifdef PANZER_HAVE_EPETRA_STACK
72 #include "Thyra_EpetraModelEvaluator.hpp"
73 #endif
74 
75 #ifdef PANZER_HAVE_TEKO
76 #include "Teko_RequestHandler.hpp"
77 #endif
78 
79 namespace Piro {
80 #ifdef PANZER_HAVE_TEMPUS
81  template <typename ScalarT> class TempusSolverForwardOnly;
82 #endif
83 }
84 
85 namespace Thyra {
86  template<typename ScalarT> class ModelEvaluator;
87  template<typename ScalarT> class LinearOpWithSolveFactoryBase;
88 }
89 
90 namespace panzer {
91  struct GlobalData;
92  class GlobalIndexer;
93  template <typename> class LinearObjFactory;
94 
95  class BlockedDOFManager;
96  class DOFManager;
97  class ConnManager;
98 }
99 
100 namespace panzer_stk {
101 
102  class STKConnManager;
103  class NOXObserverFactory;
104 #ifdef PANZER_HAVE_TEMPUS
105  class TempusObserverFactory;
106 #endif
107  class WorksetFactory;
108 
109  template<typename ScalarT>
111 
112  public:
113 
119 
128  void buildObjects(const Teuchos::RCP<const Teuchos::Comm<int> >& comm,
129  const Teuchos::RCP<panzer::GlobalData>& global_data,
131  const panzer::BCStrategyFactory & bc_factory,
133  bool meConstructionOn=true);
134 
136 
139 
141 
142 #ifdef PANZER_HAVE_TEMPUS
143  void setTempusObserverFactory(const Teuchos::RCP<const panzer_stk::TempusObserverFactory>& tempus_observer_factory);
144 #endif
145 
146  template <typename BuilderT>
147  int addResponse(const std::string & responseName,const std::vector<panzer::WorksetDescriptor> & wkstDesc,const BuilderT & builder);
148 
150  const bool write_graphviz_file=false,
151  const std::string& graphviz_file_prefix="");
152 
154 
157  const Teuchos::RCP<panzer::GlobalData>& global_data,
158 #ifdef PANZER_HAVE_TEMPUS
159  const Teuchos::RCP<Piro::TempusSolverForwardOnly<ScalarT> > tempusSolver = Teuchos::null,
160 #endif
161  const Teuchos::Ptr<const panzer_stk::NOXObserverFactory> & in_nox_observer_factory=Teuchos::null
162 #ifdef PANZER_HAVE_TEMPUS
163  , const Teuchos::Ptr<const panzer_stk::TempusObserverFactory> & in_tempus_observer_factory=Teuchos::null
164 #endif
165  );
166 
168 
171 
173 
174  const std::vector<Teuchos::RCP<panzer::PhysicsBlock> > & getPhysicsBlocks() const;
175 
178  { return m_mesh; }
179 
182  { return m_global_indexer; }
183 
186  { return m_conn_manager; }
187 
189  bool isBlockedAssembly() const
190  { return m_blockedAssembly; }
191 
194  { return m_lin_obj_factory; }
195 
196  bool isTransient() const
197  { return m_is_transient; }
198 
204  const Teuchos::RCP<Teuchos::ParameterList> & physics_block_plist,
206  const panzer::BCStrategyFactory & bc_factory,
208  bool is_transient,bool is_explicit,
209  const Teuchos::Ptr<const Teuchos::ParameterList> & bc_list=Teuchos::null,
210  const Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> > & physics_me=Teuchos::null) const;
211 
216  panzer::WorksetContainer & wkstContainer,
217  const std::vector<Teuchos::RCP<panzer::PhysicsBlock> >& physicsBlocks,
220  const Teuchos::ParameterList & closure_pl,
221  const Teuchos::ParameterList & initial_cond_pl,
222  const Teuchos::ParameterList & user_data_pl,
223  bool write_dot_files,const std::string & dot_file_prefix) const;
224 
229  const std::vector<Teuchos::RCP<panzer::PhysicsBlock> >& physicsBlocks,
235  const Teuchos::ParameterList & closure_model_pl,
236  const Teuchos::ParameterList & user_data_pl,
237  int workset_size) const;
238 
242  buildPhysicsModelEvaluator(bool buildThyraME,
246  const std::vector<Teuchos::RCP<Teuchos::Array<std::string> > > & p_names,
247  const std::vector<Teuchos::RCP<Teuchos::Array<double> > > & p_values,
249  const Teuchos::RCP<panzer::GlobalData> & global_data,
250  bool is_transient,double t_init) const;
251 
252 
254  { return useDynamicCoordinates_; }
255 
261  double getInitialTime(Teuchos::ParameterList& transient_ic_params,
262  const panzer_stk::STK_Interface& mesh) const;
263 
265  buildLOWSFactory(bool blockedAssembly,
266  const Teuchos::RCP<const panzer::GlobalIndexer> & globalIndexer,
267  const Teuchos::RCP<panzer::ConnManager> & conn_manager,
269  const Teuchos::RCP<const Teuchos::MpiComm<int> > & mpi_comm
270  #ifdef PANZER_HAVE_TEKO
271  , const Teuchos::RCP<Teko::RequestHandler> & req_handler=Teuchos::null
272  #endif
273  ) const;
274 
277  { return m_wkstContainer; }
278 
280  void addUserFieldsToMesh(panzer_stk::STK_Interface & mesh,const Teuchos::ParameterList & output_list) const;
281 
284 
285  void finalizeMeshConstruction(const STK_MeshFactory & mesh_factory,
286  const std::vector<Teuchos::RCP<panzer::PhysicsBlock> > & physicsBlocks,
287  const Teuchos::MpiComm<int> mpi_comm,
288  STK_Interface & mesh) const;
289 
290  protected:
291 
294  const std::vector<Teuchos::RCP<panzer::PhysicsBlock> >& physicsBlocks,
295  const std::vector<panzer::BC> & bcs,
296  const panzer::EquationSetFactory & eqset_factory,
297  const panzer::BCStrategyFactory& bc_factory,
300  const Teuchos::ParameterList& closure_models,
301  const panzer::LinearObjFactory<panzer::Traits> & lo_factory,
302  const Teuchos::ParameterList& user_data,
303  bool writeGraph,const std::string & graphPrefix,
304  bool write_field_managers,const std::string & field_manager_prefix) const;
305 
312  const Teuchos::RCP<panzer_stk::STK_Interface> & mesh) const;
313 
317  const std::vector<Teuchos::RCP<panzer::PhysicsBlock> > & physicsBlocks,
319  const Teuchos::ParameterList & closure_models,
320  int workset_size, Teuchos::ParameterList & user_data) const;
321 
322 
323  private:
324 
327 
329  std::vector<Teuchos::RCP<panzer::PhysicsBlock> > m_physics_blocks;
330 
340 
342 #ifdef PANZER_HAVE_TEMPUS
344 #endif
347 
349  };
350 
351 template<typename ScalarT>
352 template <typename BuilderT>
354 addResponse(const std::string & responseName,const std::vector<panzer::WorksetDescriptor> & wkstDesc,const BuilderT & builder)
355 {
356  typedef panzer::ModelEvaluator<double> PanzerME;
357 
358 #ifdef PANZER_HAVE_EPETRA_STACK
359  Teuchos::RCP<Thyra::EpetraModelEvaluator> thyra_ep_me = Teuchos::rcp_dynamic_cast<Thyra::EpetraModelEvaluator>(m_physics_me);
360  Teuchos::RCP<PanzerME> panzer_me = Teuchos::rcp_dynamic_cast<PanzerME>(m_physics_me);
361 
362  if(thyra_ep_me!=Teuchos::null && panzer_me==Teuchos::null) {
363  // I don't need no const-ness!
364  Teuchos::RCP<EpetraExt::ModelEvaluator> ep_me = Teuchos::rcp_const_cast<EpetraExt::ModelEvaluator>(thyra_ep_me->getEpetraModel());
365  Teuchos::RCP<panzer::ModelEvaluator_Epetra> ep_panzer_me = Teuchos::rcp_dynamic_cast<panzer::ModelEvaluator_Epetra>(ep_me);
366 
367  return ep_panzer_me->addResponse(responseName,wkstDesc,builder);
368  }
369  else if(panzer_me!=Teuchos::null && thyra_ep_me==Teuchos::null) {
370  return panzer_me->addResponse(responseName,wkstDesc,builder);
371  }
372 #else
373  Teuchos::RCP<PanzerME> panzer_me = Teuchos::rcp_dynamic_cast<PanzerME>(m_physics_me);
374  if(panzer_me!=Teuchos::null) {
375  return panzer_me->addResponse(responseName,wkstDesc,builder);
376  }
377 #endif
378 
379  TEUCHOS_ASSERT(false);
380  return -1;
381 }
382 
383 }
384 
385 #endif
Interface for constructing a BCStrategy_TemplateManager.
int addResponse(const std::string &responseName, const std::vector< WorksetDescriptor > &wkst_desc, const ResponseEvaluatorFactory_BuilderT &builder)
Allocates and initializes an equation set template manager.
bool isBlockedAssembly() const
Is blocked assembly?
Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > m_lin_obj_factory
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > m_response_library
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > getPhysicsModelEvaluator()
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > m_rome_me
Teuchos::RCP< panzer::GlobalIndexer > m_global_indexer
Teuchos::RCP< panzer::WorksetContainer > getWorksetContainer() const
Get the workset container associated with the mesh database.
Teuchos::RCP< panzer_stk::STK_Interface > m_mesh
Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< double > > buildLOWSFactory(bool blockedAssembly, const Teuchos::RCP< const panzer::GlobalIndexer > &globalIndexer, const Teuchos::RCP< panzer::ConnManager > &conn_manager, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, const Teuchos::RCP< const Teuchos::MpiComm< int > > &mpi_comm) const
void finalizeSolnWriterResponseLibrary(panzer::ResponseLibrary< panzer::Traits > &rl, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const Teuchos::ParameterList &closure_models, int workset_size, Teuchos::ParameterList &user_data) const
Teuchos::RCP< panzer::ConnManager > m_conn_manager
Teuchos::RCP< STK_MeshFactory > buildSTKMeshFactory(const Teuchos::ParameterList &mesh_params) const
build STK mesh factory from a mesh parameter list
int addResponse(const std::string &responseName, const std::vector< panzer::WorksetDescriptor > &wkstDesc, const BuilderT &builder)
Teuchos::RCP< panzer::WorksetContainer > m_wkstContainer
void setParameterList(Teuchos::RCP< Teuchos::ParameterList > const &paramList)
Teuchos::RCP< panzer_stk::WorksetFactory > m_user_wkst_factory
Class that provides access to worksets on each element block and side set.
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > getResponseOnlyModelEvaluator()
Teuchos::RCP< panzer::GlobalData > m_global_data
Teuchos::RCP< Thyra::ModelEvaluator< double > > cloneWithNewPhysicsBlocks(const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > &solverFactory, const Teuchos::RCP< Teuchos::ParameterList > &physics_block_plist, const Teuchos::RCP< const panzer::EquationSetFactory > &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &user_cm_factory, bool is_transient, bool is_explicit, const Teuchos::Ptr< const Teuchos::ParameterList > &bc_list=Teuchos::null, const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > &physics_me=Teuchos::null) const
Teuchos::RCP< panzer_stk::STK_Interface > getMesh() const
Get mesh object used to build model evaluator.
Teuchos::RCP< const panzer_stk::NOXObserverFactory > m_nox_observer_factory
void addUserFieldsToMesh(panzer_stk::STK_Interface &mesh, const Teuchos::ParameterList &output_list) const
Add the user fields specified by output_list to the mesh.
void setNOXObserverFactory(const Teuchos::RCP< const panzer_stk::NOXObserverFactory > &nox_observer_factory)
void buildObjects(const Teuchos::RCP< const Teuchos::Comm< int > > &comm, const Teuchos::RCP< panzer::GlobalData > &global_data, const Teuchos::RCP< const panzer::EquationSetFactory > &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, bool meConstructionOn=true)
Builds the model evaluators for a panzer assembly.
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > buildResponseOnlyModelEvaluator(const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > &thyra_me, const Teuchos::RCP< panzer::GlobalData > &global_data, const Teuchos::Ptr< const panzer_stk::NOXObserverFactory > &in_nox_observer_factory=Teuchos::null)
void buildResponses(const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const bool write_graphviz_file=false, const std::string &graphviz_file_prefix="")
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & getPhysicsBlocks() const
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > m_physics_me
Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > getLinearObjFactory() const
Get linear object factory used to build model evaluator.
void finalizeMeshConstruction(const STK_MeshFactory &mesh_factory, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const Teuchos::MpiComm< int > mpi_comm, STK_Interface &mesh) const
void writeInitialConditions(const Thyra::ModelEvaluator< ScalarT > &model, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const Teuchos::RCP< panzer::WorksetContainer > &wc, const Teuchos::RCP< const panzer::GlobalIndexer > &ugi, const Teuchos::RCP< const panzer::LinearObjFactory< panzer::Traits > > &lof, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const Teuchos::ParameterList &closure_model_pl, const Teuchos::ParameterList &user_data_pl, int workset_size) const
Write the initial conditions to exodus. Note that this is entirely self contained.
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > initializeSolnWriterResponseLibrary(const Teuchos::RCP< panzer::WorksetContainer > &wc, const Teuchos::RCP< const panzer::GlobalIndexer > &ugi, const Teuchos::RCP< const panzer::LinearObjFactory< panzer::Traits > > &lof, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh) const
#define TEUCHOS_ASSERT(assertion_test)
void setupInitialConditions(Thyra::ModelEvaluator< ScalarT > &model, panzer::WorksetContainer &wkstContainer, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const panzer::LinearObjFactory< panzer::Traits > &lof, const Teuchos::ParameterList &closure_pl, const Teuchos::ParameterList &initial_cond_pl, const Teuchos::ParameterList &user_data_pl, bool write_dot_files, const std::string &dot_file_prefix) const
Setup the initial conditions in a model evaluator. Note that this is entirely self contained...
Teuchos::RCP< panzer::FieldManagerBuilder > buildFieldManagerBuilder(const Teuchos::RCP< panzer::WorksetContainer > &wc, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const std::vector< panzer::BC > &bcs, const panzer::EquationSetFactory &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &volume_cm_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &bc_cm_factory, const Teuchos::ParameterList &closure_models, const panzer::LinearObjFactory< panzer::Traits > &lo_factory, const Teuchos::ParameterList &user_data, bool writeGraph, const std::string &graphPrefix, bool write_field_managers, const std::string &field_manager_prefix) const
Teuchos::RCP< panzer::GlobalIndexer > getGlobalIndexer() const
Get global indexer used to build model evaluator.
Teuchos::RCP< const Teuchos::ParameterList > getValidParameters() const
Teuchos::RCP< const panzer::EquationSetFactory > m_eqset_factory
std::vector< Teuchos::RCP< panzer::PhysicsBlock > > m_physics_blocks
void setUserWorksetFactory(Teuchos::RCP< panzer_stk::WorksetFactory > &user_wkst_factory)
Set user defined workset factory.
Teuchos::RCP< panzer::ConnManager > getConnManager() const
Get connection manager.
double getInitialTime(Teuchos::ParameterList &transient_ic_params, const panzer_stk::STK_Interface &mesh) const
Gets the initial time from either the input parameter list or an exodus file.
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > getResponseLibrary()
Teuchos::RCP< Thyra::ModelEvaluatorDefaultBase< double > > buildPhysicsModelEvaluator(bool buildThyraME, const Teuchos::RCP< panzer::FieldManagerBuilder > &fmb, const Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > &rLibrary, const Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > &lof, const std::vector< Teuchos::RCP< Teuchos::Array< std::string > > > &p_names, const std::vector< Teuchos::RCP< Teuchos::Array< double > > > &p_values, const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > &solverFactory, const Teuchos::RCP< panzer::GlobalData > &global_data, bool is_transient, double t_init) const