NOX  Development
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Groups Pages
Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
NOX::Epetra::Group Class Reference

Concrete implementation of NOX::Abstract::Group for Trilinos/Epetra. More...

#include <NOX_Epetra_Group.H>

Inheritance diagram for NOX::Epetra::Group:
Inheritance graph
[legend]
Collaboration diagram for NOX::Epetra::Group:
Collaboration graph
[legend]

Public Member Functions

 Group (Teuchos::ParameterList &printingParams, const Teuchos::RCP< NOX::Epetra::Interface::Required > &i, const NOX::Epetra::Vector &initialGuess)
 Constructor with NO linear system (VERY LIMITED). More...
 
 Group (Teuchos::ParameterList &printingParams, const Teuchos::RCP< NOX::Epetra::Interface::Required > &i, const NOX::Epetra::Vector &initialGuess, const Teuchos::RCP< NOX::Epetra::LinearSystem > &linSys)
 Standard Constructor.
 
 Group (const NOX::Epetra::Group &source, NOX::CopyType type=NOX::DeepCopy)
 Copy constructor. If type is DeepCopy, takes ownership of valid shared linear system.
 
virtual ~Group ()
 Destructor.
 
virtual NOX::Abstract::Groupoperator= (const NOX::Abstract::Group &source)
 Copies the source group into this group. More...
 
virtual NOX::Abstract::Groupoperator= (const NOX::Epetra::Group &source)
 See operator=(const NOX::Abstract::Group&);.
 
virtual Teuchos::RCP
< NOX::Abstract::Group
clone (CopyType type=DeepCopy) const
 Create a new Group of the same derived type as this one by cloning this one, and return a ref count pointer to the new group. More...
 
virtual Teuchos::RCP
< NOX::Epetra::Interface::Required
getRequiredInterface ()
 Return the userInterface.
 
virtual Teuchos::RCP< const
NOX::Epetra::LinearSystem
getLinearSystem () const
 Return the Linear System.
 
virtual Teuchos::RCP
< NOX::Epetra::LinearSystem
getLinearSystem ()
 Return the Linear System.
 
virtual
NOX::Abstract::Group::ReturnType 
computeJacobianConditionNumber (int maxIters, double tolerance, int krylovSubspaceSize=100, bool printOutput=false)
 
virtual double getJacobianConditionNumber () const
 Returns the condition number of the Jacobian matrix.
 
virtual void disableLinearResidualComputation (const bool disableChoice)
 Sets option to disable linear resid computation. If disabled, this saves on a MatVec per Newton but disallows inexact Newton methods.
 
"Compute" functions.
virtual void setX (const NOX::Epetra::Vector &y)
 
virtual void setX (const NOX::Abstract::Vector &y)
 Set the solution vector x to y. More...
 
virtual void computeX (const Group &grp, const NOX::Epetra::Vector &d, double step)
 
virtual void computeX (const NOX::Abstract::Group &grp, const NOX::Abstract::Vector &d, double step)
 Compute x = grp.x + step * d. More...
 
virtual
NOX::Abstract::Group::ReturnType 
computeF ()
 Compute and store F(x). More...
 
virtual
NOX::Abstract::Group::ReturnType 
computeJacobian ()
 Compute and store Jacobian. More...
 
virtual
NOX::Abstract::Group::ReturnType 
computeGradient ()
 Compute and store gradient. More...
 
virtual
NOX::Abstract::Group::ReturnType 
computeNewton (Teuchos::ParameterList &params)
 Compute the Newton direction, using parameters for the linear solve. More...
 
"Is" functions

Checks to see if various objects have been computed. Returns true if the corresponding "compute" function has been called since the last update to the solution vector (via instantiation or computeX).

virtual bool isF () const
 Return true if F is valid.
 
virtual bool isJacobian () const
 Return true if the Jacobian is valid. More...
 
virtual bool isGradient () const
 Return true if the gradient is valid. More...
 
virtual bool isNewton () const
 Return true if the Newton direction is valid. More...
 
virtual bool isNormNewtonSolveResidual () const
 Returns true if the value of the Norm of the linear model for a full Newton step ||Js + f|| is valid with respect to the current solution vector.
 
virtual bool isPreconditioner () const
 Returns true if an explicitly constructed preconditioner exists (i.e. one that is computed and saved for further use in multiple calls to applyRightPreconditioner).
 
virtual bool isConditionNumber () const
 Returns true if the condition number has been computed.
 
"Get" functions

Note that these function do not check whether or not the vectors are valid. Must use the "Is" functions for that purpose.

virtual const
NOX::Abstract::Vector
getX () const
 Return solution vector.
 
virtual const
NOX::Abstract::Vector
getF () const
 Return F(x)
 
virtual double getNormF () const
 Return 2-norm of F(x). More...
 
virtual const
NOX::Abstract::Vector
getGradient () const
 Return gradient.
 
virtual const
NOX::Abstract::Vector
getNewton () const
 Return Newton direction.
 
virtual Teuchos::RCP< const
NOX::Abstract::Vector
getXPtr () const
 Return RCP to solution vector.
 
virtual Teuchos::RCP< const
NOX::Abstract::Vector
getFPtr () const
 Return RCP to F(x)
 
virtual Teuchos::RCP< const
NOX::Abstract::Vector
getGradientPtr () const
 Return RCP to gradient.
 
virtual Teuchos::RCP< const
NOX::Abstract::Vector
getNewtonPtr () const
 Return RCP to Newton direction.
 
virtual
NOX::Abstract::Group::ReturnType 
getNormLastLinearSolveResidual (double &residual) const
 Returns the 2-norm of the residual of the linear model used in the Newton solve computation, ||Js+f||. This does not account for line search adjustments to the step length!
 
- Public Member Functions inherited from NOX::Abstract::Group
 Group ()
 Constructor. More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobianInverse (Teuchos::ParameterList &params, const NOX::Abstract::Vector &input, NOX::Abstract::Vector &result) const
 Applies the inverse of the Jacobian matrix to the given input vector and puts the answer in result. More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobianMultiVector (const NOX::Abstract::MultiVector &input, NOX::Abstract::MultiVector &result) const
 applyJacobian for multiple right-hand sides More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobianTransposeMultiVector (const NOX::Abstract::MultiVector &input, NOX::Abstract::MultiVector &result) const
 applyJacobianTranspose for multiple right-hand sides More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobianInverseMultiVector (Teuchos::ParameterList &params, const NOX::Abstract::MultiVector &input, NOX::Abstract::MultiVector &result) const
 applyJacobianInverse for multiple right-hand sides More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyRightPreconditioningMultiVector (bool useTranspose, Teuchos::ParameterList &params, const NOX::Abstract::MultiVector &input, NOX::Abstract::MultiVector &result) const
 applyRightPreconditioning for multiple right-hand sides More...
 
virtual const
NOX::Abstract::Vector
getScaledX () const
 

Protected Member Functions

virtual void resetIsValid ()
 resets the isValid flags to false
 
virtual void logLastLinearSolveStats (NOX::SolverStats &stats) const
 Adds statistics from last linear solve to the SovlerStats object.
 
virtual bool computeNormNewtonSolveResidual ()
 Computes the 2-norm of the residual of the linear model used in the Newton solve computation, ||Js+f||.
 

Protected Attributes

const NOX::Utils utils
 Printing Utilities object.
 
double normNewtonSolveResidual
 2-Norm of the Newton solve residual: ||Js+f||
 
double conditionNumber
 condition number of Jacobian
 
Teuchos::RCP
< AztecOOConditionNumber > 
azConditionNumberPtr
 Pointer to the condition number object.
 
bool linearResidCompDisabled
 
Teuchos::RCP
< NOX::Epetra::Interface::Required
userInterfacePtr
 Reference to the user supplied interface functions.
 
bool linearSolveConverged
 
int numIterations
 
double achievedTol
 
Vectors
Teuchos::RCP< NOX::Epetra::VectorxVectorPtr
 Solution vector pointer.
 
NOX::Epetra::VectorxVector
 Solution vector.
 
Teuchos::RCP< NOX::Epetra::VectorRHSVectorPtr
 Right-hand-side vector (function evaluation).
 
NOX::Epetra::VectorRHSVector
 Right-hand-side vector pointer (function evaluation).
 
Teuchos::RCP< NOX::Epetra::VectorgradVectorPtr
 Gradient vector pointer(steepest descent vector).
 
NOX::Epetra::VectorgradVector
 Gradient vector (steepest descent vector).
 
Teuchos::RCP< NOX::Epetra::VectorNewtonVectorPtr
 Newton direction vector pointer.
 
NOX::Epetra::VectorNewtonVector
 Newton direction vector.
 
Teuchos::RCP< Epetra_VectortmpVectorPtr
 An extra temporary vector, only allocated if needed.
 
IsValid flags

True if the current solution is up-to-date with respect to the currect xVector.

bool isValidRHS
 
bool isValidJacobian
 
bool isValidGrad
 
bool isValidNewton
 
bool isValidNormNewtonSolveResidual
 
bool isValidPreconditioner
 
bool isValidSolverJacOp
 
bool isValidConditionNumber
 
Shared Operators
Teuchos::RCP
< NOX::SharedObject
< NOX::Epetra::LinearSystem,
NOX::Epetra::Group > > 
sharedLinearSystemPtr
 Pointer to shared Jacobian matrix.
 
NOX::SharedObject
< NOX::Epetra::LinearSystem,
NOX::Epetra::Group > & 
sharedLinearSystem
 Reference to shared Jacobian matrix.
 

Jacobian operations.

Operations using the Jacobian matrix. These may not be defined in matrix-free scenarios.

virtual
NOX::Abstract::Group::ReturnType 
const
 Applies the inverse of the Jacobian matrix to the given input vector and puts the answer in result. More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobian (const NOX::Epetra::Vector &input, NOX::Epetra::Vector &result) const
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobian (const NOX::Abstract::Vector &input, NOX::Abstract::Vector &result) const
 Applies Jacobian to the given input vector and puts the answer in the result. More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobianTranspose (const NOX::Epetra::Vector &input, NOX::Epetra::Vector &result) const
 
virtual
NOX::Abstract::Group::ReturnType 
applyJacobianTranspose (const NOX::Abstract::Vector &input, NOX::Abstract::Vector &result) const
 Applies Jacobian-Transpose to the given input vector and puts the answer in the result. More...
 
virtual
NOX::Abstract::Group::ReturnType 
applyRightPreconditioning (bool useTranspose, Teuchos::ParameterList &params, const NOX::Epetra::Vector &input, NOX::Epetra::Vector &result) const
 
virtual
NOX::Abstract::Group::ReturnType 
applyRightPreconditioning (bool useTranspose, Teuchos::ParameterList &params, const NOX::Abstract::Vector &input, NOX::Abstract::Vector &result) const
 Apply right preconditiong to the given input vector. More...
 

Additional Inherited Members

- Public Types inherited from NOX::Abstract::Group
enum  ReturnType {
  Ok, NotDefined, BadDependency, NotConverged,
  Failed
}
 The computation of, say, the Newton direction in computeNewton() may fail in many different ways, so we have included a variety of return codes to describe the failures. Of course, we also have a code for success. More...
 

Detailed Description

Concrete implementation of NOX::Abstract::Group for Trilinos/Epetra.

This group is set up to use the linear algebra services provided

through the Trilinos/Epetra package with AztecOO for the linear solver.

Constructor & Destructor Documentation

Group::Group ( Teuchos::ParameterList printingParams,
const Teuchos::RCP< NOX::Epetra::Interface::Required > &  i,
const NOX::Epetra::Vector initialGuess 
)

Constructor with NO linear system (VERY LIMITED).

WARNING: If this constructor is used, then methods that require a Jacobian or preconditioning will not be available. You will be limited to simple algorithms like nonlinear-CG with no preconditioning.

References resetIsValid().

Member Function Documentation

Abstract::Group::ReturnType Group::applyJacobian ( const NOX::Abstract::Vector input,
NOX::Abstract::Vector result 
) const
virtual

Applies Jacobian to the given input vector and puts the answer in the result.

Computes

\[ v = J u, \]

where $J$ is the Jacobian, $u$ is the input vector, and $v$ is the result vector.

Returns

Reimplemented from NOX::Abstract::Group.

Abstract::Group::ReturnType Group::applyJacobianTranspose ( const NOX::Abstract::Vector input,
NOX::Abstract::Vector result 
) const
virtual

Applies Jacobian-Transpose to the given input vector and puts the answer in the result.

Computes

\[ v = J^T u, \]

where $J$ is the Jacobian, $u$ is the input vector, and $v$ is the result vector.

Returns

Reimplemented from NOX::Abstract::Group.

Abstract::Group::ReturnType Group::applyRightPreconditioning ( bool  useTranspose,
Teuchos::ParameterList params,
const NOX::Abstract::Vector input,
NOX::Abstract::Vector result 
) const
virtual

Apply right preconditiong to the given input vector.

Let $M$ be a right preconditioner for the Jacobian $J$; in other words, $M$ is a matrix such that

\[ JM \approx I. \]

Compute

\[ u = M^{-1} v, \]

where $u$ is the input vector and $v$ is the result vector.

If useTranspose is true, then the transpose of the preconditioner is applied:

\[ u = {M^{-1}}^T v, \]

The transpose preconditioner is currently only required for Tensor methods.

The "Tolerance" parameter specifies that the solution should be such that

\[ \frac{\| M v - u \|_2}{\max \{ 1, \|u\|_2\} } < \mbox{Tolerance} \]

Returns

The parameters are from the "Linear %Solver" sublist of the "Direction" sublist that is passed to solver during construction.

Reimplemented from NOX::Abstract::Group.

Teuchos::RCP< NOX::Abstract::Group > Group::clone ( CopyType  type = DeepCopy) const
virtual

Create a new Group of the same derived type as this one by cloning this one, and return a ref count pointer to the new group.

If type is NOX::DeepCopy, then we need to create an exact replica of "this". Otherwise, if type is NOX::ShapeCopy, we need only replicate the shape of "this" (only the memory is allocated, the values are not copied into the vectors and Jacobian). Returns NULL if clone is not supported.

Note
Any shared data should have its ownership transfered to this group from the source for a NOX::DeepCopy.

Implements NOX::Abstract::Group.

Reimplemented in LOCA::Epetra::Group.

References Teuchos::rcp().

Abstract::Group::ReturnType Group::computeF ( )
virtual

Compute and store F(x).

Note
It's generally useful to also compute and store the 2-norm of F(x) at this point for later access by the getNormF() function.
Returns

Implements NOX::Abstract::Group.

Reimplemented in LOCA::Epetra::Group.

References NOX::Epetra::Interface::Required::computeF(), NOX::Epetra::Vector::getEpetraVector(), isF(), NOX::Abstract::Group::Ok, NOX::Epetra::Interface::Required::Residual, RHSVector, userInterfacePtr, and xVector.

Referenced by LOCA::Epetra::Group::computeF().

Abstract::Group::ReturnType Group::computeGradient ( )
virtual

Compute and store gradient.

We can pose the nonlinear equation problem $F(x) = 0$ as an optimization problem as follows:

\[ \min f(x) \equiv \frac{1}{2} \|F(x)\|_2^2. \]

In that case, the gradient (of $f$) is defined as

\[ g \equiv J^T F. \]

Returns

Reimplemented from NOX::Abstract::Group.

References gradVector, isF(), isGradient(), isJacobian(), NOX::Abstract::Group::Ok, RHSVector, and sharedLinearSystem.

Abstract::Group::ReturnType Group::computeJacobian ( )
virtual

Compute and store Jacobian.

Recall that

\[ F(x) = \left[ \begin{array}{c} F_1(x) \\ F_2(x) \\ \vdots \\ F_n(x) \\ \end{array} \right]. \]

The Jacobian is denoted by $J$ and defined by

\[ J_{ij} = \frac{\partial F_i}{\partial x_j} (x). \]

Note
If this is a shared object, this group should take ownership of the Jacobian before it computes it.
Returns

Reimplemented from NOX::Abstract::Group.

Reimplemented in LOCA::Epetra::Group.

References isJacobian(), NOX::Abstract::Group::Ok, sharedLinearSystem, and xVector.

Referenced by LOCA::Epetra::Group::computeJacobian().

Abstract::Group::ReturnType Group::computeNewton ( Teuchos::ParameterList params)
virtual

Compute the Newton direction, using parameters for the linear solve.

The Newton direction is the solution, s, of

\[ J s = -F. \]

The parameters are from the "Linear %Solver" sublist of the "Direction" sublist that is passed to solver during construction.

The "Tolerance" parameter may be added/modified in the sublist of "Linear Solver" parameters that is passed into this function. The solution should be such that

\[ \frac{\| J s - (-F) \|_2}{\max \{ 1, \|F\|_2\} } < \mbox{Tolerance} \]

Returns

Reimplemented from NOX::Abstract::Group.

References NOX::Abstract::Group::applyJacobianInverse(), computeNormNewtonSolveResidual(), NOX::Epetra::Vector::init(), isF(), isJacobian(), isNewton(), NewtonVector, NOX::Abstract::Group::Ok, RHSVector, and NOX::Epetra::Vector::scale().

void Group::computeX ( const NOX::Abstract::Group grp,
const NOX::Abstract::Vector d,
double  step 
)
virtual

Compute x = grp.x + step * d.

Let $x$ denote this group's solution vector. Let $\hat x$ denote the result of grp.getX(). Then set

\[ x = \hat x + \mbox{step} \; d. \]

Note
This should invalidate the function value, Jacobian, gradient, and Newton direction.
Throw an error if the copy fails.
Returns
Reference to this object

Implements NOX::Abstract::Group.

double Group::getNormF ( ) const
virtual

Return 2-norm of F(x).

In other words,

\[ \sqrt{\sum_{i=1}^n F_i^2} \]

Implements NOX::Abstract::Group.

References isF(), NOX::Epetra::Vector::norm(), and RHSVectorPtr.

bool Group::isGradient ( ) const
virtual

Return true if the gradient is valid.

Note
Default implementation in NOX::Abstract::Group returns false.

Reimplemented from NOX::Abstract::Group.

Referenced by computeGradient(), and getGradient().

bool Group::isJacobian ( ) const
virtual

Return true if the Jacobian is valid.

Note
Default implementation in NOX::Abstract::Group returns false.

Reimplemented from NOX::Abstract::Group.

References sharedLinearSystem.

Referenced by computeGradient(), computeJacobian(), and computeNewton().

bool Group::isNewton ( ) const
virtual

Return true if the Newton direction is valid.

Note
Default implementation in NOX::Abstract::Group returns false.

Reimplemented from NOX::Abstract::Group.

Referenced by computeNewton(), and getNewton().

Abstract::Group & Group::operator= ( const NOX::Abstract::Group source)
virtual

Copies the source group into this group.

Note
Any shared data owned by the source should have its ownership transfered to this group. This may result in a secret modification to the source object.

Implements NOX::Abstract::Group.

Reimplemented in LOCA::Epetra::Group.

Referenced by LOCA::Epetra::Group::operator=().

void Group::setX ( const NOX::Abstract::Vector y)
virtual

Set the solution vector x to y.

Note
This should invalidate the function value, Jacobian, gradient, and Newton direction.
Throw an error if the copy fails.
Returns
Reference to this object

Implements NOX::Abstract::Group.

Member Data Documentation

NOX::Abstract::Group::ReturnType NOX::Epetra::Group::const

Applies the inverse of the Jacobian matrix to the given input vector and puts the answer in result.

 Computes

\[ v = J^{-1} u, \]

where $J$ is the Jacobian, $u$ is the input vector, and $v$ is the result vector.

 The "Tolerance" parameter specifies that the
 solution should be such that

\[ \frac{\| J v - u \|_2}{\max \{ 1, \|u\|_2\} } < \mbox{Tolerance} \]

\return
<ul>
<li> NOX::Abstract::Group::NotDefined - Returned by default implementation

in NOX::Abstract::Group NOX::Abstract::Group::BadDependency - If $J$ has not been computed NOX::Abstract::Group::NotConverged - If the linear solve fails to satisfy the "Tolerance" specified in params NOX::Abstract::Group::Failed - If the computation fails NOX::Abstract::Group::Ok - Otherwise

The parameter "Tolerance" may be added/modified in the list of parameters - this is the ideal solution tolerance for an iterative linear solve.

The parameter "Reuse Preconditioner" is a boolean that tells the group to turn off control of preconditioner recalculation. This is a dangerous flag but can really speed the computations if the user knows what they are doing. Toggling this flag is left to the user (ideally it should be done through a status test). Defaults to false.


The documentation for this class was generated from the following files: