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Xpetra_CrsMatrix.hpp
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46 #ifndef XPETRA_CRSMATRIX_HPP
47 #define XPETRA_CRSMATRIX_HPP
48 
49 /* this file is automatically generated - do not edit (see script/interfaces.py) */
50 
51 #include <Kokkos_DefaultNode.hpp>
52 #include "Xpetra_ConfigDefs.hpp"
53 #include "Xpetra_RowMatrix.hpp"
54 #include "Xpetra_DistObject.hpp"
55 #include "Xpetra_CrsGraph.hpp"
56 #include "Xpetra_Vector.hpp"
57 
58 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
59 #ifdef HAVE_XPETRA_TPETRA
60 #include <Kokkos_StaticCrsGraph.hpp>
61 #include <KokkosSparse_CrsMatrix.hpp>
62 #endif
63 #endif
64 
65 namespace Xpetra {
66 
67  template <class Scalar,
68  class LocalOrdinal,
69  class GlobalOrdinal,
71  class CrsMatrix
72  : public RowMatrix<Scalar,LocalOrdinal,GlobalOrdinal,Node>,
73  public DistObject<char, LocalOrdinal,GlobalOrdinal,Node>
74  {
75  public:
76  typedef Scalar scalar_type;
77  typedef LocalOrdinal local_ordinal_type;
78  typedef GlobalOrdinal global_ordinal_type;
79  typedef Node node_type;
80 
82 
83 
85  virtual ~CrsMatrix() { }
86 
88 
90 
92  virtual void
93  insertGlobalValues (GlobalOrdinal globalRow,
94  const ArrayView<const GlobalOrdinal>& cols,
95  const ArrayView<const Scalar>& vals) = 0;
96 
98  virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)= 0;
99 
101  virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)= 0;
102 
104  virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)= 0;
105 
107  virtual void setAllToScalar(const Scalar &alpha)= 0;
108 
110  virtual void scale(const Scalar &alpha)= 0;
111 
122  virtual void allocateAllValues(size_t numNonZeros,ArrayRCP<size_t> & rowptr, ArrayRCP<LocalOrdinal> & colind, ArrayRCP<Scalar> & values)=0;
123 
125  virtual void setAllValues(const ArrayRCP<size_t> & rowptr, const ArrayRCP<LocalOrdinal> & colind, const ArrayRCP<Scalar> & values)=0;
126 
128  virtual void getAllValues(ArrayRCP<const size_t>& rowptr, ArrayRCP<const LocalOrdinal>& colind, ArrayRCP<const Scalar>& values) const = 0;
129 
131 
133 
134 
136  virtual void resumeFill(const RCP< ParameterList > &params=null)= 0;
137 
139  virtual void fillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< ParameterList > &params=null)= 0;
140 
142  virtual void fillComplete(const RCP< ParameterList > &params=null)= 0;
143 
145  virtual void replaceDomainMapAndImporter(const Teuchos::RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > >& newDomainMap, Teuchos::RCP<const Import<LocalOrdinal,GlobalOrdinal,Node> > & newImporter)=0;
146 
148  virtual void expertStaticFillComplete(const RCP<const Map<LocalOrdinal,GlobalOrdinal,Node> > & domainMap,
149  const RCP<const Map<LocalOrdinal,GlobalOrdinal,Node> > & rangeMap,
150  const RCP<const Import<LocalOrdinal,GlobalOrdinal,Node> > &importer=Teuchos::null,
151  const RCP<const Export<LocalOrdinal,GlobalOrdinal,Node> > &exporter=Teuchos::null,
152  const RCP<ParameterList> &params=Teuchos::null) = 0;
154 
156 
157 
159  virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRowMap() const = 0;
160 
162  virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getColMap() const = 0;
163 
165  virtual RCP< const CrsGraph< LocalOrdinal, GlobalOrdinal, Node > > getCrsGraph() const = 0;
166 
168  virtual global_size_t getGlobalNumRows() const = 0;
169 
171  virtual global_size_t getGlobalNumCols() const = 0;
172 
174  virtual size_t getNodeNumRows() const = 0;
175 
177  virtual global_size_t getGlobalNumEntries() const = 0;
178 
180  virtual size_t getNodeNumEntries() const = 0;
181 
183  virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const = 0;
184 
186  virtual size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const = 0;
187 
189  virtual size_t getGlobalMaxNumRowEntries() const = 0;
190 
192  virtual size_t getNodeMaxNumRowEntries() const = 0;
193 
195  virtual bool isLocallyIndexed() const = 0;
196 
198  virtual bool isGloballyIndexed() const = 0;
199 
201  virtual bool isFillComplete() const = 0;
202 
204  virtual bool isFillActive() const = 0;
205 
207  virtual typename ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const = 0;
208 
210  virtual bool supportsRowViews() const = 0;
211 
213  virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const = 0;
214 
216  virtual void getGlobalRowCopy(GlobalOrdinal GlobalRow, const ArrayView<GlobalOrdinal> &indices, const ArrayView<Scalar> &values, size_t &numEntries) const = 0;
217 
219  virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const = 0;
220 
223 
225  virtual void getLocalDiagOffsets(Teuchos::ArrayRCP<size_t> &offsets) const = 0;
226 
228  virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag, const Teuchos::ArrayView<const size_t> &offsets) const = 0;
229 
232 
235 
238 
239  virtual void removeEmptyProcessesInPlace(const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> >& newMap) = 0;
240 
242  virtual bool haveGlobalConstants() const = 0;
243 
245 
247 
248 
261  virtual void apply(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &Y, Teuchos::ETransp mode=Teuchos::NO_TRANS, Scalar alpha=ScalarTraits< Scalar >::one(), Scalar beta=ScalarTraits< Scalar >::zero()) const = 0;
262 
264  virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getDomainMap() const = 0;
265 
267  virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRangeMap() const = 0;
268 
270 
272 
273 
275  virtual std::string description() const = 0;
276 
278  virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const = 0;
279 
281 
283 
284  virtual void setObjectLabel( const std::string &objectLabel ) =0;
286 
288 
289 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
290 #ifdef HAVE_XPETRA_TPETRA
291  typedef typename Kokkos::Details::ArithTraits<Scalar>::val_type impl_scalar_type;
292  typedef typename node_type::execution_space execution_space;
293 
294  // that is the local_graph_type in Tpetra::CrsGraph...
295  typedef Kokkos::StaticCrsGraph<LocalOrdinal,
296  Kokkos::LayoutLeft,
297  execution_space> local_graph_type;
301  typedef KokkosSparse::CrsMatrix<impl_scalar_type, LocalOrdinal, execution_space,void,
302  typename local_graph_type::size_type> local_matrix_type;
303 
305  virtual local_matrix_type getLocalMatrix () const = 0;
306 
307  virtual void setAllValues (const typename local_matrix_type::row_map_type& ptr,
308  const typename local_graph_type::entries_type::non_const_type& ind,
309  const typename local_matrix_type::values_type& val)=0;
310 #else
311 #ifdef __GNUC__
312 #warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
313 #endif
314 #endif
315 #endif
316 
318 
319  // Adding these functions by hand, as they're in the skip list.
320 
322  virtual size_t getNodeNumCols() const = 0;
323 
325  virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const = 0;
326 
328  virtual bool hasMatrix() const = 0;
329 
334 
335 
336  }; // CrsMatrix class
337 
338 } // Xpetra namespace
339 
340 #define XPETRA_CRSMATRIX_SHORT
341 #endif // XPETRA_CRSMATRIX_HPP
virtual void expertStaticFillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &importer=Teuchos::null, const RCP< const Export< LocalOrdinal, GlobalOrdinal, Node > > &exporter=Teuchos::null, const RCP< ParameterList > &params=Teuchos::null)=0
Expert static fill complete.
virtual global_size_t getGlobalNumRows() const =0
Number of global elements in the row map of this matrix.
virtual void apply(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &Y, Teuchos::ETransp mode=Teuchos::NO_TRANS, Scalar alpha=ScalarTraits< Scalar >::one(), Scalar beta=ScalarTraits< Scalar >::zero()) const =0
Computes the sparse matrix-multivector multiplication.
virtual size_t getNodeMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on this node.
virtual void replaceDiag(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag)=0
Replace the diagonal entries of the matrix.
virtual void residual(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &B, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &R) const =0
Compute a residual R = B - (*this) * X.
virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using local IDs.
virtual void removeEmptyProcessesInPlace(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &newMap)=0
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getColMap() const =0
Returns the Map that describes the column distribution in this matrix.
virtual void rightScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Right scale matrix using the given vector entries.
GlobalOrdinal global_ordinal_type
virtual void scale(const Scalar &alpha)=0
Scale the current values of a matrix, this = alpha*this.
virtual bool hasMatrix() const =0
Does this have an underlying matrix.
virtual void fillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< ParameterList > &params=null)=0
Signal that data entry is complete, specifying domain and range maps.
virtual void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using global IDs.
virtual size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const =0
Returns the current number of entries in the specified global row.
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRangeMap() const =0
Returns the Map associated with the range of this operator, which must be compatible with Y...
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRowMap() const =0
Returns the Map that describes the row distribution in this matrix.
virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const =0
Returns the current number of entries on this node in the specified local row.
virtual bool isLocallyIndexed() const =0
If matrix indices are in the local range, this function returns true. Otherwise, this function return...
virtual void setAllToScalar(const Scalar &alpha)=0
Set all matrix entries equal to scalarThis.
LocalOrdinal local_ordinal_type
virtual void setAllValues(const ArrayRCP< size_t > &rowptr, const ArrayRCP< LocalOrdinal > &colind, const ArrayRCP< Scalar > &values)=0
Sets the 1D pointer arrays of the graph.
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getDomainMap() const =0
Returns the Map associated with the domain of this operator. This will be null until fillComplete() i...
virtual size_t getNodeNumEntries() const =0
Returns the local number of entries in this matrix.
virtual void getGlobalRowCopy(GlobalOrdinal GlobalRow, const ArrayView< GlobalOrdinal > &indices, const ArrayView< Scalar > &values, size_t &numEntries) const =0
Extract a list of entries in a specified global row of this matrix. Put into pre-allocated storage...
virtual std::string description() const =0
A simple one-line description of this object.
virtual void allocateAllValues(size_t numNonZeros, ArrayRCP< size_t > &rowptr, ArrayRCP< LocalOrdinal > &colind, ArrayRCP< Scalar > &values)=0
Allocates and returns ArrayRCPs of the Crs arrays — This is an Xpetra-only routine.
virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of local indices in a specified row of the matrix.
virtual global_size_t getGlobalNumCols() const =0
Number of global columns in the matrix.
virtual bool supportsRowViews() const =0
Returns true if getLocalRowView() and getGlobalRowView() are valid for this class.
virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using global IDs.
virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const =0
Extract a list of entries in a specified local row of the matrix. Put into storage allocated by calli...
virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const =0
Print the object with some verbosity level to an FancyOStream object.
virtual void replaceDomainMapAndImporter(const Teuchos::RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &newDomainMap, Teuchos::RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &newImporter)=0
Replaces the current domainMap and importer with the user-specified objects.
virtual void resumeFill(const RCP< ParameterList > &params=null)=0
virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using local IDs.
virtual bool haveGlobalConstants() const =0
Returns true if globalConstants have been computed; false otherwise.
size_t global_size_t
Global size_t object.
virtual global_size_t getGlobalNumEntries() const =0
Returns the global number of entries in this matrix.
virtual size_t getGlobalMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on all nodes.
virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag) const =0
Get a copy of the diagonal entries owned by this node, with local row indices.
virtual ~CrsMatrix()
Destructor.
virtual ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const =0
Returns the Frobenius norm of the matrix.
virtual void setObjectLabel(const std::string &objectLabel)=0
virtual bool isFillComplete() const =0
Returns true if the matrix is in compute mode, i.e. if fillComplete() has been called.
virtual void getLocalDiagOffsets(Teuchos::ArrayRCP< size_t > &offsets) const =0
Get offsets of the diagonal entries in the matrix.
virtual size_t getNodeNumCols() const =0
Returns the number of matrix columns owned on the calling node.
virtual RCP< const CrsGraph< LocalOrdinal, GlobalOrdinal, Node > > getCrsGraph() const =0
Returns the CrsGraph associated with this matrix.
virtual bool isGloballyIndexed() const =0
If matrix indices are in the global range, this function returns true. Otherwise, this function retur...
virtual size_t getNodeNumRows() const =0
Returns the number of matrix rows owned on the calling node.
virtual bool isFillActive() const =0
Returns true if the matrix is in edit mode.
virtual void getAllValues(ArrayRCP< const size_t > &rowptr, ArrayRCP< const LocalOrdinal > &colind, ArrayRCP< const Scalar > &values) const =0
Gets the 1D pointer arrays of the graph.
virtual void leftScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Left scale matrix using the given vector entries.
virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of global indices in a specified row of the matrix.