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FadMPAssembly/BoxElemFixture.hpp
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43 
44 #ifndef KOKKOS_EXAMPLE_BOXELEMFIXTURE_HPP
45 #define KOKKOS_EXAMPLE_BOXELEMFIXTURE_HPP
46 
47 #include <stdio.h>
48 #include <utility>
49 
50 #include <Kokkos_Core.hpp>
51 
52 #include <HexElement.hpp>
53 #include <BoxElemPart.hpp>
54 
55 //----------------------------------------------------------------------------
56 
57 namespace Kokkos {
58 namespace Example {
59 
64 
65  const double m_a ;
66  const double m_b ;
67  const double m_c ;
68  const unsigned m_max_x ;
69  const unsigned m_max_y ;
70  const unsigned m_max_z ;
71 
72  MapGridUnitCube( const unsigned grid_max_x ,
73  const unsigned grid_max_y ,
74  const unsigned grid_max_z ,
75  const double bubble_x ,
76  const double bubble_y ,
77  const double bubble_z )
78  : m_a( bubble_x )
79  , m_b( bubble_y )
80  , m_c( bubble_z )
81  , m_max_x( grid_max_x )
82  , m_max_y( grid_max_y )
83  , m_max_z( grid_max_z )
84  {}
85 
86  template< typename Scalar >
87  KOKKOS_INLINE_FUNCTION
88  void operator()( int grid_x ,
89  int grid_y ,
90  int grid_z ,
91  Scalar & coord_x ,
92  Scalar & coord_y ,
93  Scalar & coord_z ) const
94  {
95  // Map to a unit cube [0,1]^3
96 
97  const double x = double(grid_x) / double(m_max_x);
98  const double y = double(grid_y) / double(m_max_y);
99  const double z = double(grid_z) / double(m_max_z);
100 
101  coord_x = x + x * x * ( x - 1 ) * ( x - 1 ) * m_a ;
102  coord_y = y + y * y * ( y - 1 ) * ( y - 1 ) * m_b ;
103  coord_z = z + z * z * ( z - 1 ) * ( z - 1 ) * m_c ;
104  }
105 };
106 
107 } // namespace Example
108 } // namespace Kokkos
109 
110 //----------------------------------------------------------------------------
111 
112 namespace Kokkos {
113 namespace Example {
114 
121 template< class Device ,
122  BoxElemPart::ElemOrder Order ,
123  class CoordinateMap = MapGridUnitCube >
125 public:
126 
127  typedef Device execution_space ;
128 
129  enum { SpaceDim = 3 };
130  enum { ElemNode = Order == BoxElemPart::ElemLinear ? 8 :
131  Order == BoxElemPart::ElemQuadratic ? 27 : 0 };
132 
133 private:
134 
136 
138  CoordinateMap m_coord_map ;
139 
140  Kokkos::View< double *[SpaceDim] , Device > m_node_coord ;
141  Kokkos::View< unsigned*[SpaceDim] , Device > m_node_grid ;
142  Kokkos::View< unsigned*[ElemNode] , Device > m_elem_node ;
143  Kokkos::View< unsigned*[2] , Device > m_recv_node ;
144  Kokkos::View< unsigned*[2] , Device > m_send_node ;
145  Kokkos::View< unsigned* , Device > m_send_node_id ;
146 
147  unsigned char m_elem_node_local[ ElemNode ][4] ;
148 
149 public:
150 
151  typedef Kokkos::View< const unsigned * [ElemNode], Device > elem_node_type ;
152  typedef Kokkos::View< const double * [SpaceDim], Device > node_coord_type ;
153  typedef Kokkos::View< const unsigned * [SpaceDim], Device > node_grid_type ;
154  typedef Kokkos::View< const unsigned * [2] , Device > comm_list_type ;
155  typedef Kokkos::View< const unsigned * , Device > send_nodeid_type ;
156 
157  KOKKOS_INLINE_FUNCTION
158  unsigned node_count() const { return m_node_grid.extent(0); }
159 
160  KOKKOS_INLINE_FUNCTION
161  unsigned node_count_owned() const { return m_box_part.owns_node_count(); }
162 
163  KOKKOS_INLINE_FUNCTION
164  unsigned node_count_global() const { return m_box_part.global_node_count(); }
165 
166  KOKKOS_INLINE_FUNCTION
167  unsigned elem_count() const { return m_elem_node.extent(0); }
168 
169  KOKKOS_INLINE_FUNCTION
170  unsigned elem_count_global() const { return m_box_part.global_elem_count(); }
171 
172  KOKKOS_INLINE_FUNCTION
173  unsigned elem_node_local( unsigned inode , unsigned k ) const
174  { return m_elem_node_local[inode][k] ; }
175 
176  KOKKOS_INLINE_FUNCTION
177  unsigned node_grid( unsigned inode , unsigned iaxis ) const
178  { return m_node_grid(inode,iaxis); }
179 
180  KOKKOS_INLINE_FUNCTION
181  size_t node_global_index( unsigned local ) const
182  {
183  const unsigned node_grid[SpaceDim] =
184  { m_node_grid(local,0) , m_node_grid(local,1) , m_node_grid(local,2) };
185  return m_box_part.global_node_id( node_grid );
186  }
187 
188  KOKKOS_INLINE_FUNCTION
189  double node_coord( unsigned inode , unsigned iaxis ) const
190  { return m_node_coord(inode,iaxis); }
191 
192  KOKKOS_INLINE_FUNCTION
193  unsigned node_grid_max( unsigned iaxis ) const
194  { return m_box_part.global_coord_max(iaxis); }
195 
196  KOKKOS_INLINE_FUNCTION
197  unsigned elem_node( unsigned ielem , unsigned inode ) const
198  { return m_elem_node(ielem,inode); }
199 
200  elem_node_type elem_node() const { return m_elem_node ; }
202  node_grid_type node_grid() const { return m_node_grid ; }
203  comm_list_type recv_node() const { return m_recv_node ; }
204  comm_list_type send_node() const { return m_send_node ; }
206 
207  KOKKOS_INLINE_FUNCTION
209  : m_box_part( rhs.m_box_part )
210  , m_coord_map( rhs.m_coord_map )
211  , m_node_coord( rhs.m_node_coord )
212  , m_node_grid( rhs.m_node_grid )
213  , m_elem_node( rhs.m_elem_node )
214  , m_recv_node( rhs.m_recv_node )
215  , m_send_node( rhs.m_send_node )
217  {
218  for ( unsigned i = 0 ; i < ElemNode ; ++i ) {
219  m_elem_node_local[i][0] = rhs.m_elem_node_local[i][0] ;
220  m_elem_node_local[i][1] = rhs.m_elem_node_local[i][1] ;
221  m_elem_node_local[i][2] = rhs.m_elem_node_local[i][2] ;
222  m_elem_node_local[i][3] = 0 ;
223  }
224  }
225 
227  {
228  m_box_part = rhs.m_box_part ;
229  m_coord_map = rhs.m_coord_map ;
230  m_node_coord = rhs.m_node_coord ;
231  m_node_grid = rhs.m_node_grid ;
232  m_elem_node = rhs.m_elem_node ;
233  m_recv_node = rhs.m_recv_node ;
234  m_send_node = rhs.m_send_node ;
236 
237  for ( unsigned i = 0 ; i < ElemNode ; ++i ) {
238  m_elem_node_local[i][0] = rhs.m_elem_node_local[i][0] ;
239  m_elem_node_local[i][1] = rhs.m_elem_node_local[i][1] ;
240  m_elem_node_local[i][2] = rhs.m_elem_node_local[i][2] ;
241  m_elem_node_local[i][3] = 0 ;
242  }
243  return *this ;
244  }
245 
247  const unsigned global_size ,
248  const unsigned global_rank ,
249  const unsigned elem_nx ,
250  const unsigned elem_ny ,
251  const unsigned elem_nz ,
252  const double bubble_x = 1.1 ,
253  const double bubble_y = 1.2 ,
254  const double bubble_z = 1.3 )
255  : m_box_part( Order , decompose , global_size , global_rank , elem_nx , elem_ny , elem_nz )
256  , m_coord_map( m_box_part.global_coord_max(0) ,
257  m_box_part.global_coord_max(1) ,
258  m_box_part.global_coord_max(2) ,
259  bubble_x ,
260  bubble_y ,
261  bubble_z )
262  , m_node_coord( "fixture_node_coord" , m_box_part.uses_node_count() )
263  , m_node_grid( "fixture_node_grid" , m_box_part.uses_node_count() )
264  , m_elem_node( "fixture_elem_node" , m_box_part.uses_elem_count() )
265  , m_recv_node( "fixture_recv_node" , m_box_part.recv_node_msg_count() )
266  , m_send_node( "fixture_send_node" , m_box_part.send_node_msg_count() )
267  , m_send_node_id( "fixture_send_node_id" , m_box_part.send_node_id_count() )
268  {
269  {
270  const hex_data elem_data ;
271 
272  for ( unsigned i = 0 ; i < ElemNode ; ++i ) {
273  m_elem_node_local[i][0] = elem_data.eval_map[i][0] ;
274  m_elem_node_local[i][1] = elem_data.eval_map[i][1] ;
275  m_elem_node_local[i][2] = elem_data.eval_map[i][2] ;
276  m_elem_node_local[i][3] = 0 ;
277  }
278  }
279 
280  const size_t nwork =
281  std::max( m_recv_node.extent(0) ,
282  std::max( m_send_node.extent(0) ,
283  std::max( m_send_node_id.extent(0) ,
284  std::max( m_node_grid.extent(0) ,
285  m_elem_node.extent(0) * m_elem_node.extent(1) ))));
286 
287  Kokkos::parallel_for( nwork , *this );
288  }
289 
290 
291  // Initialization:
292 
293  KOKKOS_INLINE_FUNCTION
294  void operator()( size_t i ) const
295  {
296  if ( i < m_elem_node.extent(0) * m_elem_node.extent(1) ) {
297 
298  const size_t ielem = i / ElemNode ;
299  const size_t inode = i % ElemNode ;
300 
301  unsigned elem_grid[SpaceDim] ;
302  unsigned node_grid[SpaceDim] ;
303 
304  m_box_part.uses_elem_coord( ielem , elem_grid );
305 
306  enum { elem_node_scale = Order == BoxElemPart::ElemLinear ? 1 :
307  Order == BoxElemPart::ElemQuadratic ? 2 : 0 };
308 
309  node_grid[0] = elem_node_scale * elem_grid[0] + m_elem_node_local[inode][0] ;
310  node_grid[1] = elem_node_scale * elem_grid[1] + m_elem_node_local[inode][1] ;
311  node_grid[2] = elem_node_scale * elem_grid[2] + m_elem_node_local[inode][2] ;
312 
313  m_elem_node(ielem,inode) = m_box_part.local_node_id( node_grid );
314  }
315 
316  if ( i < m_node_grid.extent(0) ) {
317  unsigned node_grid[SpaceDim] ;
318  m_box_part.local_node_coord( i , node_grid );
319  m_node_grid(i,0) = node_grid[0] ;
320  m_node_grid(i,1) = node_grid[1] ;
321  m_node_grid(i,2) = node_grid[2] ;
322 
323  m_coord_map( node_grid[0] ,
324  node_grid[1] ,
325  node_grid[2] ,
326  m_node_coord(i,0) ,
327  m_node_coord(i,1) ,
328  m_node_coord(i,2) );
329  }
330 
331  if ( i < m_recv_node.extent(0) ) {
334  }
335 
336  if ( i < m_send_node.extent(0) ) {
339  }
340 
341  if ( i < m_send_node_id.extent(0) ) {
343  }
344  }
345 };
346 
347 } // namespace Example
348 } // namespace Kokkos
349 
350 //----------------------------------------------------------------------------
351 
352 #endif /* #ifndef KOKKOS_EXAMPLE_BOXELEMFIXTURE_HPP */
353 
KOKKOS_INLINE_FUNCTION unsigned elem_node_local(unsigned inode, unsigned k) const
KOKKOS_INLINE_FUNCTION void uses_elem_coord(size_t lid, unsigned c[]) const
Kokkos::View< const unsigned *[2], Device > comm_list_type
KOKKOS_INLINE_FUNCTION unsigned send_node_count(unsigned msg) const
KOKKOS_INLINE_FUNCTION unsigned local_node_id(const unsigned c[]) const
KOKKOS_INLINE_FUNCTION void operator()(int grid_x, int grid_y, int grid_z, Scalar &coord_x, Scalar &coord_y, Scalar &coord_z) const
KOKKOS_INLINE_FUNCTION size_t global_node_id(const unsigned c[]) const
KOKKOS_INLINE_FUNCTION size_t global_elem_count() const
Kokkos::View< const double *[SpaceDim], Device > node_coord_type
BoxElemFixture & operator=(const BoxElemFixture &rhs)
Kokkos::View< const unsigned *[ElemNode], Device > elem_node_type
Map a grid onto a unit cube with smooth nonlinear grading of the map.
Kokkos::View< unsigned *[2], Device > m_recv_node
Kokkos::View< const unsigned *[SpaceDim], Device > node_grid_type
KOKKOS_INLINE_FUNCTION unsigned node_count_global() const
KOKKOS_INLINE_FUNCTION unsigned send_node_id(unsigned item) const
KOKKOS_INLINE_FUNCTION unsigned node_count_owned() const
Kokkos::View< unsigned *[2], Device > m_send_node
KOKKOS_INLINE_FUNCTION unsigned elem_count() const
KOKKOS_INLINE_FUNCTION void local_node_coord(size_t lid, unsigned coord[]) const
Kokkos::View< const unsigned *, Device > send_nodeid_type
KOKKOS_INLINE_FUNCTION unsigned elem_node(unsigned ielem, unsigned inode) const
Kokkos::Example::HexElement_TensorData< ElemNode > hex_data
KOKKOS_INLINE_FUNCTION unsigned node_count() const
KOKKOS_INLINE_FUNCTION PCE< Storage > max(const typename PCE< Storage >::value_type &a, const PCE< Storage > &b)
KOKKOS_INLINE_FUNCTION unsigned node_grid_max(unsigned iaxis) const
KOKKOS_INLINE_FUNCTION size_t owns_node_count() const
Kokkos::View< unsigned *[ElemNode], Device > m_elem_node
KOKKOS_INLINE_FUNCTION void operator()(size_t i) const
KOKKOS_INLINE_FUNCTION double node_coord(unsigned inode, unsigned iaxis) const
Kokkos::View< double *[SpaceDim], Device > m_node_coord
KOKKOS_INLINE_FUNCTION unsigned elem_count_global() const
KOKKOS_INLINE_FUNCTION size_t node_global_index(unsigned local) const
BoxElemFixture(const BoxElemPart::Decompose decompose, const unsigned global_size, const unsigned global_rank, const unsigned elem_nx, const unsigned elem_ny, const unsigned elem_nz, const double bubble_x=1.1, const double bubble_y=1.2, const double bubble_z=1.3)
MapGridUnitCube(const unsigned grid_max_x, const unsigned grid_max_y, const unsigned grid_max_z, const double bubble_x, const double bubble_y, const double bubble_z)
KOKKOS_INLINE_FUNCTION unsigned send_node_rank(unsigned msg) const
KOKKOS_INLINE_FUNCTION unsigned node_grid(unsigned inode, unsigned iaxis) const
KOKKOS_INLINE_FUNCTION unsigned recv_node_count(unsigned msg) const
KOKKOS_INLINE_FUNCTION unsigned global_coord_max(unsigned axis) const
KOKKOS_INLINE_FUNCTION unsigned recv_node_rank(unsigned msg) const
Partition a box of hexahedral elements among subdomains.
Kokkos::View< unsigned *[SpaceDim], Device > m_node_grid
KOKKOS_INLINE_FUNCTION size_t global_node_count() const
KOKKOS_INLINE_FUNCTION BoxElemFixture(const BoxElemFixture &rhs)
Generate a distributed unstructured finite element mesh from a partitioned NX*NY*NZ box of elements...
Kokkos::View< unsigned *, Device > m_send_node_id