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Xpetra_Matrix.hpp
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47 // WARNING: This code is experimental. Backwards compatibility should not be expected.
48 
49 #ifndef XPETRA_MATRIX_HPP
50 #define XPETRA_MATRIX_HPP
51 
52 #include <Kokkos_DefaultNode.hpp>
53 
54 #include "Xpetra_ConfigDefs.hpp"
55 #include "Xpetra_Exceptions.hpp"
56 
57 #include "Xpetra_MultiVector.hpp"
58 #include "Xpetra_CrsGraph.hpp"
59 #include "Xpetra_CrsMatrix.hpp"
61 #include "Xpetra_MatrixView.hpp"
62 #include "Xpetra_Operator.hpp"
63 #include "Xpetra_StridedMap.hpp"
65 
67 #include <Teuchos_Hashtable.hpp>
68 
73 namespace Xpetra {
74 
91  typedef std::string viewLabel_t;
92 
93  template <class Scalar = Operator<>::scalar_type,
94  class LocalOrdinal = Operator<>::local_ordinal_type,
95  class GlobalOrdinal = typename Operator<LocalOrdinal>::global_ordinal_type,
96  class Node = typename Operator<LocalOrdinal, GlobalOrdinal>::node_type>
97  class Matrix : public Xpetra::Operator< Scalar, LocalOrdinal, GlobalOrdinal, Node > {
103 
104  public:
105  typedef Scalar scalar_type;
106  typedef LocalOrdinal local_ordinal_type;
107  typedef GlobalOrdinal global_ordinal_type;
108  typedef Node node_type;
109 
110 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
111 #ifdef HAVE_XPETRA_TPETRA
112  typedef typename CrsMatrix::local_matrix_type local_matrix_type;
113 #endif
114 #endif
115 
117 
118 
119  Matrix() { }
120 
122  virtual ~Matrix() { }
123 
125 
127 
128  void CreateView(viewLabel_t viewLabel, const RCP<const Map> & rowMap, const RCP<const Map> & colMap) {
129  TEUCHOS_TEST_FOR_EXCEPTION(operatorViewTable_.containsKey(viewLabel) == true, Xpetra::Exceptions::RuntimeError, "Xpetra::Matrix.CreateView(): a view labeled '" + viewLabel + "' already exist.");
130  RCP<MatrixView> view = rcp(new MatrixView(rowMap, colMap));
131  operatorViewTable_.put(viewLabel, view);
132  }
133 
134  // JG TODO: why this is a member function??
135  void CreateView(const viewLabel_t viewLabel, const RCP<const Matrix>& A, bool transposeA = false, const RCP<const Matrix>& B = Teuchos::null, bool transposeB = false) {
136  RCP<const Map> domainMap = Teuchos::null;
137  RCP<const Map> rangeMap = Teuchos::null;
138 
139  const size_t blkSize = 1;
140  std::vector<size_t> stridingInfo(1, blkSize);
141  LocalOrdinal stridedBlockId = -1;
142 
143 
144  if (A->IsView(viewLabel)) {
145  rangeMap = transposeA ? A->getColMap(viewLabel) : A->getRowMap(viewLabel);
146  domainMap = transposeA ? A->getRowMap(viewLabel) : A->getColMap(viewLabel); // will be overwritten if B != Teuchos::null
147 
148  } else {
149  rangeMap = transposeA ? A->getDomainMap() : A->getRangeMap();
150  domainMap = transposeA ? A->getRangeMap() : A->getDomainMap();
151 
152  if (viewLabel == "stridedMaps") {
153  rangeMap = Xpetra::StridedMapFactory<LocalOrdinal, GlobalOrdinal, Node>::Build(rangeMap, stridingInfo, stridedBlockId);
154  domainMap = Xpetra::StridedMapFactory<LocalOrdinal, GlobalOrdinal, Node>::Build(domainMap, stridingInfo, stridedBlockId);
155  }
156  }
157 
158  if (B != Teuchos::null ) {
159  // B has strided Maps
160 
161  if (B->IsView(viewLabel)) {
162  domainMap = transposeB ? B->getRowMap(viewLabel) : B->getColMap(viewLabel);
163 
164  } else {
165  domainMap = transposeB ? B->getRangeMap() : B->getDomainMap();
166 
167  if (viewLabel == "stridedMaps")
168  domainMap = Xpetra::StridedMapFactory<LocalOrdinal, GlobalOrdinal, Node>::Build(domainMap, stridingInfo, stridedBlockId);
169  }
170  }
171 
172 
173  if (IsView(viewLabel))
174  RemoveView(viewLabel);
175 
176  CreateView(viewLabel, rangeMap, domainMap);
177  }
178 
181  int last = out.getOutputToRootOnly();
182  Teuchos::OSTab tab(out);
183  out.setOutputToRootOnly(0);
184  Teuchos::Array<viewLabel_t> viewLabels;
186  operatorViewTable_.arrayify(viewLabels,viewList);
187  out << "views associated with this operator" << std::endl;
188  for (int i=0; i<viewLabels.size(); ++i)
189  out << viewLabels[i] << std::endl;
190  out.setOutputToRootOnly(last);
191  }
192 
193 
194  void RemoveView(const viewLabel_t viewLabel) {
195  TEUCHOS_TEST_FOR_EXCEPTION(operatorViewTable_.containsKey(viewLabel) == false, Xpetra::Exceptions::RuntimeError, "Xpetra::Matrix.RemoveView(): view '" + viewLabel + "' does not exist.");
196  TEUCHOS_TEST_FOR_EXCEPTION(viewLabel == GetDefaultViewLabel(), Xpetra::Exceptions::RuntimeError, "Xpetra::Matrix.RemoveView(): view '" + viewLabel + "' is the default view and cannot be removed.");
197  operatorViewTable_.remove(viewLabel);
198  }
199 
200  const viewLabel_t SwitchToView(const viewLabel_t viewLabel) {
201  TEUCHOS_TEST_FOR_EXCEPTION(operatorViewTable_.containsKey(viewLabel) == false, Xpetra::Exceptions::RuntimeError, "Xpetra::Matrix.SwitchToView(): view '" + viewLabel + "' does not exist.");
202  viewLabel_t oldViewLabel = GetCurrentViewLabel();
203  currentViewLabel_ = viewLabel;
204  return oldViewLabel;
205  }
206 
207  bool IsView(const viewLabel_t viewLabel) const {
208  return operatorViewTable_.containsKey(viewLabel);
209  }
210 
212 
214 
216 
218 
220 
221 
223 
234  virtual void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView<const GlobalOrdinal> &cols, const ArrayView<const Scalar> &vals) = 0;
235 
237 
244  virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView<const LocalOrdinal> &cols, const ArrayView<const Scalar> &vals) = 0;
245 
247 
252  virtual void replaceGlobalValues(GlobalOrdinal globalRow,
253  const ArrayView<const GlobalOrdinal> &cols,
254  const ArrayView<const Scalar> &vals) = 0;
255 
257 
260  virtual void replaceLocalValues(LocalOrdinal localRow,
261  const ArrayView<const LocalOrdinal> &cols,
262  const ArrayView<const Scalar> &vals) = 0;
263 
265  virtual void setAllToScalar(const Scalar &alpha)= 0;
266 
268  virtual void scale(const Scalar &alpha)= 0;
269 
271 
273 
274 
283  virtual void resumeFill(const RCP< ParameterList > &params=null) = 0;
284 
296  virtual void fillComplete(const RCP<const Map> &domainMap, const RCP<const Map> &rangeMap, const RCP<ParameterList> &params = null) =0;
297 
311  //TODO : Get ride of "Tpetra"::OptimizeOption
312  virtual void fillComplete(const RCP<ParameterList> &params=null) =0;
313 
315 
317 
318 
320  virtual const RCP<const Map> & getRowMap() const { return getRowMap(GetCurrentViewLabel()); }
321 
323  virtual const RCP<const Map> & getRowMap(viewLabel_t viewLabel) const {
324  TEUCHOS_TEST_FOR_EXCEPTION(operatorViewTable_.containsKey(viewLabel) == false, Xpetra::Exceptions::RuntimeError, "Xpetra::Matrix.GetRowMap(): view '" + viewLabel + "' does not exist.");
325  return operatorViewTable_.get(viewLabel)->GetRowMap();
326  }
327 
330  virtual const RCP<const Map> & getColMap() const { return getColMap(GetCurrentViewLabel()); }
331 
333  virtual const RCP<const Map> & getColMap(viewLabel_t viewLabel) const {
334  TEUCHOS_TEST_FOR_EXCEPTION(operatorViewTable_.containsKey(viewLabel) == false, Xpetra::Exceptions::RuntimeError, "Xpetra::Matrix.GetColMap(): view '" + viewLabel + "' does not exist.");
335  return operatorViewTable_.get(viewLabel)->GetColMap();
336  }
337 
339 
341  virtual global_size_t getGlobalNumRows() const =0;
342 
344 
346  virtual global_size_t getGlobalNumCols() const =0;
347 
349  virtual size_t getNodeNumRows() const =0;
350 
352  virtual global_size_t getGlobalNumEntries() const =0;
353 
355  virtual size_t getNodeNumEntries() const =0;
356 
358 
359  virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const =0;
360 
362 
364  virtual size_t getGlobalMaxNumRowEntries() const =0;
365 
367 
369  virtual size_t getNodeMaxNumRowEntries() const =0;
370 
372  virtual bool isLocallyIndexed() const =0;
373 
375  virtual bool isGloballyIndexed() const =0;
376 
378  virtual bool isFillComplete() const =0;
379 
381 
393  virtual void getLocalRowCopy(LocalOrdinal LocalRow,
394  const ArrayView<LocalOrdinal> &Indices,
395  const ArrayView<Scalar> &Values,
396  size_t &NumEntries
397  ) const =0;
398 
400 
409  virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView<const GlobalOrdinal> &indices, ArrayView<const Scalar> &values) const =0;
410 
412 
421  virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView<const LocalOrdinal> &indices, ArrayView<const Scalar> &values) const =0;
422 
424 
427 
429  virtual typename ScalarTraits<Scalar>::magnitudeType getFrobeniusNorm() const = 0;
430 
433 
436 
437 
439  virtual bool haveGlobalConstants() const = 0;
440 
441 
443 
445 
446 
448 
457  //TODO virtual=0 // TODO: Add default parameters ?
458 // virtual void multiply(const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> & X, MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &Y, Teuchos::ETransp trans, Scalar alpha, Scalar beta) const=0;
459 
461 
463  //{@
464 
467 
468  // TODO: first argument of doImport/doExport should be a Xpetra::DistObject
469 
471  virtual void doImport(const Matrix &source,
473 
475  virtual void doExport(const Matrix &dest,
477 
479  virtual void doImport(const Matrix &source,
481 
483  virtual void doExport(const Matrix &dest,
485 
486  // @}
487 
489 
490 
491  // TODO: describe of views can be done here
492 
493  // /** \brief Return a simple one-line description of this object. */
494  // virtual std::string description() const =0;
495 
496  // /** \brief Print the object with some verbosity level to an FancyOStream object. */
497  // virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const =0;
498 
500 
501 
503 
504 
506  virtual std::string description() const =0;
507 
511 
513 
514  virtual void setObjectLabel( const std::string &objectLabel ) =0;
516 
517  // JG: Added:
518 
520  virtual bool hasCrsGraph() const =0;
521 
523  virtual RCP<const CrsGraph> getCrsGraph() const =0;
524 
525  // ----------------------------------------------------------------------------------
526  // "TEMPORARY" VIEW MECHANISM
533  void SetFixedBlockSize(LocalOrdinal blksize, GlobalOrdinal offset=0) {
534 
535  TEUCHOS_TEST_FOR_EXCEPTION(isFillComplete() == false, Exceptions::RuntimeError, "Xpetra::Matrix::SetFixedBlockSize(): operator is not filled and completed."); // TODO: do we need this? we just wanna "copy" the domain and range map
536 
537  std::vector<size_t> stridingInfo;
538  stridingInfo.push_back(Teuchos::as<size_t>(blksize));
539  LocalOrdinal stridedBlockId = -1;
540 
542  this->getRangeMap(),
543  stridingInfo,
544  stridedBlockId,
545  offset
546  );
548  this->getDomainMap(),
549  stridingInfo,
550  stridedBlockId,
551  offset
552  );
553 
554  if(IsView("stridedMaps") == true) RemoveView("stridedMaps");
555  CreateView("stridedMaps", stridedRangeMap, stridedDomainMap);
556  }
557 
558  //==========================================================================
559 
560  LocalOrdinal GetFixedBlockSize() const {
561  if(IsView("stridedMaps")==true) {
564  TEUCHOS_TEST_FOR_EXCEPTION(rangeMap == Teuchos::null, Exceptions::BadCast, "Xpetra::Matrix::GetFixedBlockSize(): rangeMap is not of type StridedMap");
565  TEUCHOS_TEST_FOR_EXCEPTION(domainMap == Teuchos::null, Exceptions::BadCast, "Xpetra::Matrix::GetFixedBlockSize(): domainMap is not of type StridedMap");
566  TEUCHOS_TEST_FOR_EXCEPTION(domainMap->getFixedBlockSize() != rangeMap->getFixedBlockSize(), Exceptions::RuntimeError, "Xpetra::Matrix::GetFixedBlockSize(): block size of rangeMap and domainMap are different.");
567  return Teuchos::as<LocalOrdinal>(domainMap->getFixedBlockSize()); // TODO: why LocalOrdinal?
568  } else
569  //TEUCHOS_TEST_FOR_EXCEPTION(false, Exceptions::RuntimeError, "Xpetra::Matrix::GetFixedBlockSize(): no strided maps available."); // TODO remove this
570  return 1;
571  }; //TODO: why LocalOrdinal?
572 
573  // ----------------------------------------------------------------------------------
574 
575  virtual void SetMaxEigenvalueEstimate(Scalar const &sigma) {
576  operatorViewTable_.get(GetCurrentViewLabel())->SetMaxEigenvalueEstimate(sigma);
577  }
578 
579  // ----------------------------------------------------------------------------------
580 
581  virtual Scalar GetMaxEigenvalueEstimate() const {
582  return operatorViewTable_.get(GetCurrentViewLabel())->GetMaxEigenvalueEstimate();
583  }
584 
585  // ----------------------------------------------------------------------------------
586 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
587 #ifdef HAVE_XPETRA_TPETRA
588  virtual local_matrix_type getLocalMatrix () const = 0;
590 #else
591 #ifdef __GNUC__
592 #warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
593 #endif
594 #endif
595 #endif
596  // ----------------------------------------------------------------------------------
597 
598  protected:
599  Teuchos::Hashtable<viewLabel_t, RCP<MatrixView> > operatorViewTable_; // hashtable storing the operator views (keys = view names, values = views).
600 
601  viewLabel_t defaultViewLabel_; // label of the view associated with inital Matrix construction
602  viewLabel_t currentViewLabel_; // label of the current view
603 
604  }; //class Matrix
605 
606 } //namespace Xpetra
607 
608 #define XPETRA_MATRIX_SHORT
609 #endif //XPETRA_MATRIX_DECL_HPP
virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using local IDs.
virtual size_t getNodeMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on this node.
virtual size_t getNodeNumRows() const =0
Returns the number of matrix rows owned on the calling node.
virtual size_t getNodeNumEntries() const =0
Returns the local number of entries in this matrix.
virtual global_size_t getGlobalNumRows() const =0
Returns the number of global rows in this matrix.
static RCP< StridedMap > Build(UnderlyingLib lib, global_size_t numGlobalElements, GlobalOrdinal indexBase, std::vector< size_t > &stridingInfo, const Teuchos::RCP< const Teuchos::Comm< int > > &comm, LocalOrdinal stridedBlockId=-1, GlobalOrdinal offset=0, LocalGlobal lg=Xpetra::GloballyDistributed)
Map constructor with Xpetra-defined contiguous uniform distribution.
virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of global indices in a specified row of the matrix.
#define TEUCHOS_TEST_FOR_EXCEPTION(throw_exception_test, Exception, msg)
void RemoveView(const viewLabel_t viewLabel)
virtual global_size_t getGlobalNumCols() const =0
Returns the number of global columns in the matrix.
LocalOrdinal local_ordinal_type
virtual ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const =0
Get Frobenius norm of the matrix.
virtual void resumeFill(const RCP< ParameterList > &params=null)=0
Exception throws to report errors in the internal logical of the program.
virtual size_t getGlobalMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on all nodes.
Teuchos::Hashtable< viewLabel_t, RCP< MatrixView > > operatorViewTable_
virtual bool isGloballyIndexed() const =0
If matrix indices are in the global range, this function returns true. Otherwise, this function retur...
virtual void doExport(const Matrix &dest, const Import< LocalOrdinal, GlobalOrdinal, Node > &importer, CombineMode CM)=0
Export.
virtual const RCP< const Map > & getColMap() const
Returns the Map that describes the column distribution in this matrix. This might be null until fillC...
Exception indicating invalid cast attempted.
virtual const Teuchos::RCP< const Xpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > getMap() const =0
Multiplies this matrix by a MultiVector.
virtual void SetMaxEigenvalueEstimate(Scalar const &sigma)
virtual void fillComplete(const RCP< const Map > &domainMap, const RCP< const Map > &rangeMap, const RCP< ParameterList > &params=null)=0
Signal that data entry is complete, specifying domain and range maps.
Xpetra::CrsMatrix< Scalar, LocalOrdinal, GlobalOrdinal, Node > CrsMatrix
virtual void setObjectLabel(const std::string &objectLabel)=0
virtual ~Matrix()
Destructor.
virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag) const =0
Get a copy of the diagonal entries owned by this node, with local row indices.
virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of local indices in a specified row of the matrix.
virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const =0
Extract a list of entries in a specified local row of the matrix. Put into storage allocated by calli...
viewLabel_t defaultViewLabel_
virtual void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using global IDs.
void SetFixedBlockSize(LocalOrdinal blksize, GlobalOrdinal offset=0)
TEUCHOS_DEPRECATED RCP< T > rcp(T *p, Dealloc_T dealloc, bool owns_mem)
virtual bool haveGlobalConstants() const =0
Returns true if globalConstants have been computed; false otherwise.
virtual void rightScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Right scale matrix using the given vector entries.
virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const =0
Print the object with some verbosity level to an FancyOStream object.
bool IsView(const viewLabel_t viewLabel) const
const viewLabel_t & GetCurrentViewLabel() const
Xpetra::Map< LocalOrdinal, GlobalOrdinal, Node > Map
virtual bool isFillComplete() const =0
Returns true if fillComplete() has been called and the matrix is in compute mode. ...
void CreateView(viewLabel_t viewLabel, const RCP< const Map > &rowMap, const RCP< const Map > &colMap)
virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using local IDs.
virtual const RCP< const Map > & getColMap(viewLabel_t viewLabel) const
Returns the Map that describes the column distribution in this matrix.
viewLabel_t currentViewLabel_
const viewLabel_t SwitchToDefaultView()
virtual void leftScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Left scale matrix using the given vector entries.
basic_FancyOStream & setOutputToRootOnly(const int rootRank)
int getOutputToRootOnly() const
void PrintViews(Teuchos::FancyOStream &out) const
Print all of the views associated with the Matrix.
LocalOrdinal GetFixedBlockSize() const
virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const =0
Returns the current number of entries on this node in the specified local row.
std::string viewLabel_t
Xpetra::CrsGraph< LocalOrdinal, GlobalOrdinal, Node > CrsGraph
size_t global_size_t
Global size_t object.
virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using global IDs.
static const EVerbosityLevel verbLevel_default
virtual void doImport(const Matrix &source, const Import< LocalOrdinal, GlobalOrdinal, Node > &importer, CombineMode CM)=0
Import.
virtual RCP< const CrsGraph > getCrsGraph() const =0
Returns the CrsGraph associated with this matrix.
virtual std::string description() const =0
Return a simple one-line description of this object.
virtual bool isLocallyIndexed() const =0
If matrix indices are in the local range, this function returns true. Otherwise, this function return...
virtual Scalar GetMaxEigenvalueEstimate() const
size_type size() const
virtual global_size_t getGlobalNumEntries() const =0
Returns the global number of entries in this matrix.
virtual Teuchos::RCP< const Map > getRangeMap() const =0
The Map associated with the range of this operator, which must be compatible with Y...
CombineMode
Xpetra::Combine Mode enumerable type.
virtual const RCP< const Map > & getRowMap() const
Returns the Map that describes the row distribution in this matrix.
void CreateView(const viewLabel_t viewLabel, const RCP< const Matrix > &A, bool transposeA=false, const RCP< const Matrix > &B=Teuchos::null, bool transposeB=false)
virtual void scale(const Scalar &alpha)=0
Scale the current values of a matrix, this = alpha*this.
const viewLabel_t & GetDefaultViewLabel() const
Xpetra::MatrixView< Scalar, LocalOrdinal, GlobalOrdinal, Node > MatrixView
virtual const RCP< const Map > & getRowMap(viewLabel_t viewLabel) const
Returns the Map that describes the row distribution in this matrix.
virtual void setAllToScalar(const Scalar &alpha)=0
Set all matrix entries equal to scalar.
virtual Teuchos::RCP< const Map > getDomainMap() const =0
The Map associated with the domain of this operator, which must be compatible with X...
Xpetra::CrsMatrixFactory< Scalar, LocalOrdinal, GlobalOrdinal, Node > CrsMatrixFactory
Xpetra-specific matrix class.
Class that stores a strided map.
const viewLabel_t SwitchToView(const viewLabel_t viewLabel)
virtual bool hasCrsGraph() const =0
Supports the getCrsGraph() call.
GlobalOrdinal global_ordinal_type