46 #ifndef MUELU_GEOMETRICINTERPOLATIONPFACTORY_DEF_HPP
47 #define MUELU_GEOMETRICINTERPOLATIONPFACTORY_DEF_HPP
49 #include "Xpetra_CrsGraph.hpp"
50 #include "Xpetra_CrsMatrixUtils.hpp"
54 #include "MueLu_Aggregates.hpp"
61 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
65 #define SET_VALID_ENTRY(name) validParamList->setEntry(name, MasterList::getEntry(name))
68 #undef SET_VALID_ENTRY
72 "Generating factory of the matrix A");
74 "Aggregates generated by StructuredAggregationFactory used to construct a piece-constant prolongator.");
76 "Graph generated by StructuredAggregationFactory used to construct a piece-linear prolongator.");
78 "Fine level coordinates used to construct piece-wise linear prolongator and coarse level coordinates.");
80 "map of the coarse coordinates' GIDs as indexed on the fine mesh.");
82 "map of the coarse coordinates' GIDs as indexed on the coarse mesh.");
84 "Fine level nullspace used to construct the coarse level nullspace.");
86 "Number of spacial dimensions in the problem.");
88 "Number of nodes per spatial dimension on the coarse grid.");
89 validParamList->
set<
bool> (
"keep coarse coords",
false,
"Flag to keep coordinates for special coarse grid solve");
90 validParamList->
set<
bool> (
"interp: remove small entries",
true,
"Remove small interpolation coeficient from prolongator to reduce fill-in on coarse level");
92 return validParamList;
95 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
100 Input(fineLevel,
"A");
101 Input(fineLevel,
"Nullspace");
102 Input(fineLevel,
"numDimensions");
103 Input(fineLevel,
"prolongatorGraph");
104 Input(fineLevel,
"lCoarseNodesPerDim");
106 if( pL.
get<
bool>(
"interp: build coarse coordinates") ||
107 (pL.
get<
int>(
"interp: interpolation order") == 1) ) {
108 Input(fineLevel,
"Coordinates");
109 Input(fineLevel,
"coarseCoordinatesFineMap");
110 Input(fineLevel,
"coarseCoordinatesMap");
115 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
118 return BuildP(fineLevel, coarseLevel);
121 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
128 if(
const char* dbg = std::getenv(
"MUELU_GEOMETRICINTERPOLATIONPFACTORY_DEBUG")) {
129 out = Teuchos::fancyOStream(Teuchos::rcpFromRef(std::cout));
135 *out <<
"Starting GeometricInterpolationPFactory::BuildP." << std::endl;
139 const bool removeSmallEntries = pL.
get<
bool>(
"interp: remove small entries");
140 const bool buildCoarseCoordinates = pL.
get<
bool>(
"interp: build coarse coordinates");
141 const int interpolationOrder = pL.
get<
int> (
"interp: interpolation order");
142 const int numDimensions = Get<int>(fineLevel,
"numDimensions");
152 if(buildCoarseCoordinates || (interpolationOrder == 1)) {
154 RCP<const Map> coarseCoordsFineMap = Get< RCP<const Map> >(fineLevel,
"coarseCoordinatesFineMap");
155 RCP<const Map> coarseCoordsMap = Get< RCP<const Map> >(fineLevel,
"coarseCoordinatesMap");
156 fineCoordinates = Get< RCP<realvaluedmultivector_type> >(fineLevel,
"Coordinates");
157 coarseCoordinates = Xpetra::MultiVectorFactory<real_type,LO,GO,Node>::Build(coarseCoordsFineMap,
158 fineCoordinates->getNumVectors());
159 RCP<const Import> coordsImporter = ImportFactory::Build(fineCoordinates->getMap(),
160 coarseCoordsFineMap);
161 coarseCoordinates->doImport(*fineCoordinates, *coordsImporter, Xpetra::INSERT);
162 coarseCoordinates->replaceMap(coarseCoordsMap);
164 Set(coarseLevel,
"Coordinates", coarseCoordinates);
166 if(pL.
get<
bool>(
"keep coarse coords")) {
171 *out <<
"Fine and coarse coordinates have been loaded from the fine level and set on the coarse level." << std::endl;
173 if(interpolationOrder == 0) {
176 BuildConstantP(P, prolongatorGraph, A);
177 }
else if(interpolationOrder == 1) {
182 const size_t dofsPerNode =
static_cast<size_t>(A->GetFixedBlockSize());
183 const size_t numColIndices = prolongatorColMap->getNodeNumElements();
186 "Something went wrong, the number of columns in the prolongator is not a multiple of dofsPerNode!");
187 const size_t numGhostCoords = numColIndices / dofsPerNode;
188 const GO indexBase = prolongatorColMap->getIndexBase();
189 const GO coordIndexBase = fineCoordinates->getMap()->getIndexBase();
192 Array<GO> ghostCoordIndices(numGhostCoords);
193 for(
size_t ghostCoordIdx = 0; ghostCoordIdx < numGhostCoords; ++ghostCoordIdx) {
194 ghostCoordIndices[ghostCoordIdx]
195 = (prolongatorColIndices[ghostCoordIdx*dofsPerNode] - indexBase) / dofsPerNode
198 RCP<Map> ghostCoordMap = MapFactory::Build(fineCoordinates->getMap()->lib(),
199 prolongatorColMap->getGlobalNumElements() / dofsPerNode,
202 fineCoordinates->getMap()->getComm());
205 = Xpetra::MultiVectorFactory<real_type,LO,GO,NO>::Build(ghostCoordMap,
206 fineCoordinates->getNumVectors());
207 RCP<const Import> ghostImporter = ImportFactory::Build(coarseCoordinates->getMap(),
209 ghostCoordinates->doImport(*coarseCoordinates, *ghostImporter, Xpetra::INSERT);
211 BuildLinearP(coarseLevel, A, prolongatorGraph, fineCoordinates,
212 ghostCoordinates, numDimensions, removeSmallEntries, P);
215 *out <<
"The prolongator matrix has been built." << std::endl;
220 RCP<MultiVector> fineNullspace = Get< RCP<MultiVector> > (fineLevel,
"Nullspace");
221 RCP<MultiVector> coarseNullspace = MultiVectorFactory::Build(P->getDomainMap(),
222 fineNullspace->getNumVectors());
225 Set(coarseLevel,
"Nullspace", coarseNullspace);
228 *out <<
"The coarse nullspace is constructed and set on the coarse level." << std::endl;
230 Set(coarseLevel,
"P", P);
232 *out <<
"GeometricInterpolationPFactory::BuildP has completed." << std::endl;
236 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
242 if(
const char* dbg = std::getenv(
"MUELU_GEOMETRICINTERPOLATIONPFACTORY_DEBUG")) {
243 out = Teuchos::fancyOStream(Teuchos::rcpFromRef(std::cout));
249 *out <<
"BuildConstantP" << std::endl;
251 std::vector<size_t> strideInfo(1);
252 strideInfo[0] = A->GetFixedBlockSize();
254 StridedMapFactory::Build(prolongatorGraph->getDomainMap(), strideInfo);
256 *out <<
"Call prolongator constructor" << std::endl;
260 P =
rcp(
new CrsMatrixWrap(prolongatorGraph, dummyList));
261 RCP<CrsMatrix> PCrs = rcp_dynamic_cast<CrsMatrixWrap>(P)->getCrsMatrix();
262 PCrs->setAllToScalar(1.0);
263 PCrs->fillComplete();
266 if (A->IsView(
"stridedMaps") ==
true) {
267 P->CreateView(
"stridedMaps", A->getRowMap(
"stridedMaps"), stridedDomainMap);
269 P->CreateView(
"stridedMaps", P->getRangeMap(), stridedDomainMap);
274 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
280 const int numDimensions,
const bool removeSmallEntries,
285 if(
const char* dbg = std::getenv(
"MUELU_GEOMETRICINTERPOLATIONPFACTORY_DEBUG")) {
286 out = Teuchos::fancyOStream(Teuchos::rcpFromRef(std::cout));
293 const int numInterpolationPoints = 1 << numDimensions;
294 const int dofsPerNode = A->GetFixedBlockSize();
297 P =
rcp(
new CrsMatrixWrap(prolongatorGraph, dummyList));
298 RCP<CrsMatrix> PCrs = rcp_dynamic_cast<CrsMatrixWrap>(P)->getCrsMatrix();
302 *out <<
"Entering BuildLinearP" << std::endl;
306 const LO numFineNodes = fineCoordinates->getLocalLength();
307 const LO numGhostNodes = ghostCoordinates->getLocalLength();
310 const real_type realZero = Teuchos::as<real_type>(0.0);
313 for(
int dim = 0; dim < 3; ++dim) {
314 if(dim < numDimensions) {
315 fineCoords[dim] = fineCoordinates->getData(dim);
316 ghostCoords[dim] = ghostCoordinates->getData(dim);
318 fineCoords[dim] = fineZero;
319 ghostCoords[dim] = ghostZero;
323 *out <<
"Coordinates extracted from the multivectors!" << std::endl;
326 LO interpolationNodeIdx = 0, rowIdx = 0;
331 for(LO nodeIdx = 0; nodeIdx < numFineNodes; ++nodeIdx) {
332 if(PCrs->getNumEntriesInLocalRow(nodeIdx*dofsPerNode) == 1) {
335 for(LO dof = 0; dof < dofsPerNode; ++dof) {
336 rowIdx = nodeIdx*dofsPerNode + dof;
337 prolongatorGraph->getLocalRowView(rowIdx, colIndices);
338 PCrs->replaceLocalValues(rowIdx, colIndices, values());
344 for(
int dim = 0; dim < 3; ++dim) {
345 coords[0][dim] = fineCoords[dim][nodeIdx];
347 prolongatorGraph->getLocalRowView(nodeIdx*dofsPerNode, colIndices);
348 for(
int interpolationIdx=0; interpolationIdx < numInterpolationPoints; ++interpolationIdx) {
349 coords[interpolationIdx + 1].
resize(3);
350 interpolationNodeIdx = colIndices[interpolationIdx] / dofsPerNode;
351 for(
int dim = 0; dim < 3; ++dim) {
352 coords[interpolationIdx + 1][dim] = ghostCoords[dim][interpolationNodeIdx];
356 ComputeLinearInterpolationStencil(numDimensions, numInterpolationPoints, coords, stencil);
358 values.
resize(numInterpolationPoints);
359 for(LO valueIdx = 0; valueIdx < numInterpolationPoints; ++valueIdx) {
360 values[valueIdx] = Teuchos::as<SC>(stencil[valueIdx]);
364 for(LO dof = 0; dof < dofsPerNode; ++dof) {
365 rowIdx = nodeIdx*dofsPerNode + dof;
366 prolongatorGraph->getLocalRowView(rowIdx, colIndices);
367 PCrs->replaceLocalValues(rowIdx, colIndices, values());
373 *out <<
"The calculation of the interpolation stencils has completed." << std::endl;
375 PCrs->fillComplete();
378 *out <<
"All values in P have been set and fillComplete has been performed." << std::endl;
386 if(removeSmallEntries) {
387 *out <<
"Entering remove small entries" << std::endl;
393 PCrs->getAllValues(rowptrOrig, colindOrig, valuesOrig);
395 const size_t numRows =
static_cast<size_t>(rowptrOrig.
size() - 1);
399 size_t countRemovedEntries = 0;
400 for(
size_t rowIdx = 0; rowIdx < numRows; ++rowIdx) {
401 for(
size_t entryIdx = rowptrOrig[rowIdx]; entryIdx < rowptrOrig[rowIdx + 1]; ++entryIdx) {
404 rowPtr[rowIdx + 1] = rowptrOrig[rowIdx + 1] - countRemovedEntries;
405 nnzOnRows[rowIdx] = rowPtr[rowIdx + 1] - rowPtr[rowIdx];
407 GetOStream(
Statistics1) <<
"interp: number of small entries removed= " << countRemovedEntries <<
" / " << rowptrOrig[numRows] << std::endl;
409 size_t countKeptEntries = 0;
412 for(
size_t entryIdx = 0; entryIdx < rowptrOrig[numRows]; ++entryIdx) {
414 colInd[countKeptEntries] = colindOrig[entryIdx];
415 values[countKeptEntries] = valuesOrig[entryIdx];
420 P =
rcp(
new CrsMatrixWrap(prolongatorGraph->getRowMap(),
421 prolongatorGraph->getColMap(),
423 RCP<CrsMatrix> PCrsSqueezed = rcp_dynamic_cast<CrsMatrixWrap>(P)->getCrsMatrix();
424 PCrsSqueezed->resumeFill();
425 PCrsSqueezed->setAllValues(rowPtr, colInd, values);
426 PCrsSqueezed->expertStaticFillComplete(prolongatorGraph->getDomainMap(),
427 prolongatorGraph->getRangeMap());
430 std::vector<size_t> strideInfo(1);
431 strideInfo[0] = dofsPerNode;
433 StridedMapFactory::Build(prolongatorGraph->getDomainMap(), strideInfo);
435 *out <<
"The strided maps of P have been computed" << std::endl;
438 if (A->IsView(
"stridedMaps") ==
true) {
439 P->CreateView(
"stridedMaps", A->getRowMap(
"stridedMaps"), stridedDomainMap);
441 P->CreateView(
"stridedMaps", P->getRangeMap(), stridedDomainMap);
447 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
473 int iter = 0, max_iter = 5;
474 real_type functions[4][8], norm_ref = 1.0, norm2 = 1.0, tol = 1.0e-5;
475 paramCoords.
size(numDimensions);
477 while( (iter < max_iter) && (norm2 > tol*norm_ref) ) {
480 solutionDirection.
size(numDimensions);
481 residual.
size(numDimensions);
485 GetInterpolationFunctions(numDimensions, paramCoords, functions);
486 for(LO i = 0; i < numDimensions; ++i) {
487 residual(i) = coord[0][i];
488 for(LO k = 0; k < numInterpolationPoints; ++k) {
489 residual(i) -= functions[0][k]*coord[k+1][i];
492 norm_ref += residual(i)*residual(i);
493 if(i == numDimensions - 1) {
494 norm_ref = std::sqrt(norm_ref);
498 for(LO j = 0; j < numDimensions; ++j) {
499 for(LO k = 0; k < numInterpolationPoints; ++k) {
500 Jacobian(i,j) += functions[j+1][k]*coord[k+1][i];
511 for(LO i = 0; i < numDimensions; ++i) {
512 paramCoords(i) = paramCoords(i) + solutionDirection(i);
516 GetInterpolationFunctions(numDimensions, paramCoords, functions);
517 for(LO i = 0; i < numDimensions; ++i) {
519 for(LO k = 0; k < numInterpolationPoints; ++k) {
520 tmp -= functions[0][k]*coord[k+1][i];
525 norm2 = std::sqrt(norm2);
529 for(LO i = 0; i < numInterpolationPoints; ++i) {
530 stencil[i] = functions[0][i];
535 template <
class Scalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
540 real_type xi = 0.0, eta = 0.0, zeta = 0.0, denominator = 0.0;
541 if(numDimensions == 1) {
542 xi = parametricCoordinates[0];
544 }
else if(numDimensions == 2) {
545 xi = parametricCoordinates[0];
546 eta = parametricCoordinates[1];
548 }
else if(numDimensions == 3) {
549 xi = parametricCoordinates[0];
550 eta = parametricCoordinates[1];
551 zeta = parametricCoordinates[2];
555 functions[0][0] = (1.0 - xi)*(1.0 - eta)*(1.0 - zeta) / denominator;
556 functions[0][1] = (1.0 + xi)*(1.0 - eta)*(1.0 - zeta) / denominator;
557 functions[0][2] = (1.0 - xi)*(1.0 + eta)*(1.0 - zeta) / denominator;
558 functions[0][3] = (1.0 + xi)*(1.0 + eta)*(1.0 - zeta) / denominator;
559 functions[0][4] = (1.0 - xi)*(1.0 - eta)*(1.0 + zeta) / denominator;
560 functions[0][5] = (1.0 + xi)*(1.0 - eta)*(1.0 + zeta) / denominator;
561 functions[0][6] = (1.0 - xi)*(1.0 + eta)*(1.0 + zeta) / denominator;
562 functions[0][7] = (1.0 + xi)*(1.0 + eta)*(1.0 + zeta) / denominator;
564 functions[1][0] = -(1.0 - eta)*(1.0 - zeta) / denominator;
565 functions[1][1] = (1.0 - eta)*(1.0 - zeta) / denominator;
566 functions[1][2] = -(1.0 + eta)*(1.0 - zeta) / denominator;
567 functions[1][3] = (1.0 + eta)*(1.0 - zeta) / denominator;
568 functions[1][4] = -(1.0 - eta)*(1.0 + zeta) / denominator;
569 functions[1][5] = (1.0 - eta)*(1.0 + zeta) / denominator;
570 functions[1][6] = -(1.0 + eta)*(1.0 + zeta) / denominator;
571 functions[1][7] = (1.0 + eta)*(1.0 + zeta) / denominator;
573 functions[2][0] = -(1.0 - xi)*(1.0 - zeta) / denominator;
574 functions[2][1] = -(1.0 + xi)*(1.0 - zeta) / denominator;
575 functions[2][2] = (1.0 - xi)*(1.0 - zeta) / denominator;
576 functions[2][3] = (1.0 + xi)*(1.0 - zeta) / denominator;
577 functions[2][4] = -(1.0 - xi)*(1.0 + zeta) / denominator;
578 functions[2][5] = -(1.0 + xi)*(1.0 + zeta) / denominator;
579 functions[2][6] = (1.0 - xi)*(1.0 + zeta) / denominator;
580 functions[2][7] = (1.0 + xi)*(1.0 + zeta) / denominator;
582 functions[3][0] = -(1.0 - xi)*(1.0 - eta) / denominator;
583 functions[3][1] = -(1.0 + xi)*(1.0 - eta) / denominator;
584 functions[3][2] = -(1.0 - xi)*(1.0 + eta) / denominator;
585 functions[3][3] = -(1.0 + xi)*(1.0 + eta) / denominator;
586 functions[3][4] = (1.0 - xi)*(1.0 - eta) / denominator;
587 functions[3][5] = (1.0 + xi)*(1.0 - eta) / denominator;
588 functions[3][6] = (1.0 - xi)*(1.0 + eta) / denominator;
589 functions[3][7] = (1.0 + xi)*(1.0 + eta) / denominator;
595 #endif // MUELU_GEOMETRICINTERPOLATIONPFACTORY_DEF_HPP
basic_FancyOStream & setShowProcRank(const bool showProcRank)
T & get(const std::string &name, T def_value)
ParameterList & set(std::string const &name, T const &value, std::string const &docString="", RCP< const ParameterEntryValidator > const &validator=null)
Timer to be used in factories. Similar to Monitor but with additional timers.
#define TEUCHOS_TEST_FOR_EXCEPTION(throw_exception_test, Exception, msg)
void BuildLinearP(Level &coarseLevel, RCP< Matrix > &A, RCP< const CrsGraph > &prolongatorGraph, RCP< realvaluedmultivector_type > &fineCoordinates, RCP< realvaluedmultivector_type > &ghostCoordinates, const int numDimensions, const bool keepD2, RCP< Matrix > &P) const
static const NoFactory * get()
void GetInterpolationFunctions(const LO numDimensions, const Teuchos::SerialDenseVector< LO, real_type > parametricCoordinates, real_type functions[4][8]) const
static RCP< Time > getNewTimer(const std::string &name)
TEUCHOS_DEPRECATED RCP< T > rcp(T *p, Dealloc_T dealloc, bool owns_mem)
void Build(Level &fineLevel, Level &coarseLevel) const
Build an object with this factory.
Class that holds all level-specific information.
void ComputeLinearInterpolationStencil(const int numDimensions, const int numInterpolationPoints, const Array< Array< real_type > > coord, Array< real_type > &stencil) const
Timer to be used in factories. Similar to SubMonitor but adds a timer level by level.
void factorWithEquilibration(bool flag)
#define SET_VALID_ENTRY(name)
basic_FancyOStream & setShowAllFrontMatter(const bool showAllFrontMatter)
void resize(size_type new_size, const value_type &x=value_type())
void Set(const std::string &ename, const T &entry, const FactoryBase *factory=NoFactory::get())
void DeclareInput(Level &fineLevel, Level &coarseLevel) const
Input.
int size(OrdinalType length_in)
int setVectors(const RCP< SerialDenseMatrix< OrdinalType, ScalarType > > &X, const RCP< SerialDenseMatrix< OrdinalType, ScalarType > > &B)
RCP< const ParameterList > GetValidParameterList() const
Return a const parameter list of valid parameters that setParameterList() will accept.
Exception throws to report errors in the internal logical of the program.
void BuildConstantP(RCP< Matrix > &P, RCP< const CrsGraph > &prolongatorGraph, RCP< Matrix > &A) const
typename Teuchos::ScalarTraits< SC >::coordinateType real_type
void BuildP(Level &fineLevel, Level &coarseLevel) const
Abstract Build method.
int setMatrix(const RCP< SerialDenseMatrix< OrdinalType, ScalarType > > &A)