Amesos2 - Direct Sparse Solver Interfaces  Version of the Day
Amesos2_Basker_def.hpp
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43 
53 #ifndef AMESOS2_BASKER_DEF_HPP
54 #define AMESOS2_BASKER_DEF_HPP
55 
56 #include <Teuchos_Tuple.hpp>
57 #include <Teuchos_ParameterList.hpp>
58 #include <Teuchos_StandardParameterEntryValidators.hpp>
59 
61 #include "Amesos2_Basker_decl.hpp"
62 
63 namespace Amesos2 {
64 
65 
66 template <class Matrix, class Vector>
67 Basker<Matrix,Vector>::Basker(
68  Teuchos::RCP<const Matrix> A,
69  Teuchos::RCP<Vector> X,
70  Teuchos::RCP<const Vector> B )
71  : SolverCore<Amesos2::Basker,Matrix,Vector>(A, X, B)
72  , is_contiguous_(true)
73 // , basker()
74 {
75  //Nothing
76 }
77 
78 
79 template <class Matrix, class Vector>
80 Basker<Matrix,Vector>::~Basker( )
81 {}
82 
83 template <class Matrix, class Vector>
84 bool
86  return (this->root_ && (this->matrixA_->getComm()->getSize() == 1) && is_contiguous_);
87 }
88 
89 template<class Matrix, class Vector>
90 int
92 {
93  /* TODO: Define what it means for Basker
94  */
95 #ifdef HAVE_AMESOS2_TIMERS
96  Teuchos::TimeMonitor preOrderTimer(this->timers_.preOrderTime_);
97 #endif
98 
99  return(0);
100 }
101 
102 
103 template <class Matrix, class Vector>
104 int
106 {
107  /*No symbolic factoriztion*/
108  return(0);
109 }
110 
111 
112 template <class Matrix, class Vector>
113 int
115 {
116  using Teuchos::as;
117 
118  int info = 0;
119  if ( this->root_ ){
120  { // Do factorization
121  #ifdef HAVE_AMESOS2_TIMERS
122  Teuchos::TimeMonitor numFactTimer(this->timers_.numFactTime_);
123  #endif
124 
125  #ifdef HAVE_AMESOS2_VERBOSE_DEBUG
126  std::cout << "Basker:: Before numeric factorization" << std::endl;
127  std::cout << "nzvals_ : " << nzvals_.toString() << std::endl;
128  std::cout << "rowind_ : " << rowind_.toString() << std::endl;
129  std::cout << "colptr_ : " << colptr_.toString() << std::endl;
130  #endif
131 
132  basker_dtype * pBaskerValues = function_map::convert_scalar(host_nzvals_view_.data());
133  info = basker.factor(this->globalNumRows_, this->globalNumCols_, this->globalNumNonZeros_, host_col_ptr_view_.data(), host_rows_view_.data(), pBaskerValues);
134 
135  // This is set after numeric factorization complete as pivoting can be used;
136  // In this case, a discrepancy between symbolic and numeric nnz total can occur.
137  this->setNnzLU( as<size_t>(basker.get_NnzLU() ) ) ;
138  }
139 
140  }
141 
142  /* All processes should have the same error code */
143  Teuchos::broadcast(*(this->matrixA_->getComm()), 0, &info);
144 
145  //global_size_type info_st = as<global_size_type>(info);
146  /* TODO : Proper error messages*/
147  TEUCHOS_TEST_FOR_EXCEPTION( (info == -1) ,
148  std::runtime_error,
149  "Basker: Could not alloc space for L and U");
150  TEUCHOS_TEST_FOR_EXCEPTION( (info == -2),
151  std::runtime_error,
152  "Basker: Could not alloc needed work space");
153  TEUCHOS_TEST_FOR_EXCEPTION( (info == -3) ,
154  std::runtime_error,
155  "Basker: Could not alloc additional memory needed for L and U");
156  TEUCHOS_TEST_FOR_EXCEPTION( (info > 0) ,
157  std::runtime_error,
158  "Basker: Zero pivot found at: " << info );
159 
160  return(info);
161 }
162 
163 
164 template <class Matrix, class Vector>
165 int
167  const Teuchos::Ptr<MultiVecAdapter<Vector> > X,
168  const Teuchos::Ptr<const MultiVecAdapter<Vector> > B) const
169 {
170  int ierr = 0; // returned error code
171 
172  using Teuchos::as;
173 
174  const global_size_type ld_rhs = this->root_ ? X->getGlobalLength() : 0;
175  const size_t nrhs = X->getGlobalNumVectors();
176 
177  { // Get values from RHS B
178 #ifdef HAVE_AMESOS2_TIMERS
179  Teuchos::TimeMonitor mvConvTimer(this->timers_.vecConvTime_);
180  Teuchos::TimeMonitor redistTimer( this->timers_.vecRedistTime_ );
181 #endif
182 
183  if ( single_proc_optimization() && nrhs == 1 ) {
184  // no msp creation
185  Util::get_1d_copy_helper_kokkos_view<MultiVecAdapter<Vector>,
186  host_solve_array_t>::do_get(B, bValues_, as<size_t>(ld_rhs));
187 
188  Util::get_1d_copy_helper_kokkos_view<MultiVecAdapter<Vector>,
189  host_solve_array_t>::do_get(X, xValues_, as<size_t>(ld_rhs));
190  }
191  else {
192  if ( is_contiguous_ == true ) {
193  Util::get_1d_copy_helper_kokkos_view<MultiVecAdapter<Vector>,
194  host_solve_array_t>::do_get(B, bValues_, as<size_t>(ld_rhs), ROOTED, this->rowIndexBase_);
195  }
196  else {
197  Util::get_1d_copy_helper_kokkos_view<MultiVecAdapter<Vector>,
198  host_solve_array_t>::do_get(B, bValues_, as<size_t>(ld_rhs), CONTIGUOUS_AND_ROOTED, this->rowIndexBase_);
199  }
200 
201  // See Amesos2_Tacho_def.hpp for notes on why we 'get' x here.
202  if ( is_contiguous_ == true ) {
203  Util::get_1d_copy_helper_kokkos_view<MultiVecAdapter<Vector>,
204  host_solve_array_t>::do_get(X, xValues_, as<size_t>(ld_rhs), ROOTED, this->rowIndexBase_);
205  }
206  else {
207  Util::get_1d_copy_helper_kokkos_view<MultiVecAdapter<Vector>,
208  host_solve_array_t>::do_get(X, xValues_, as<size_t>(ld_rhs), CONTIGUOUS_AND_ROOTED, this->rowIndexBase_);
209  }
210  }
211  }
212 
213  if ( this->root_ ) { // do solve
214 #ifdef HAVE_AMESOS2_TIMERS
215  Teuchos::TimeMonitor solveTimer(this->timers_.solveTime_);
216 #endif
217 
218  basker_dtype * pxBaskerValues = function_map::convert_scalar(xValues_.data());
219  basker_dtype * pbBaskerValues = function_map::convert_scalar(bValues_.data());
220  ierr = basker.solveMultiple(nrhs, pbBaskerValues, pxBaskerValues);
221  }
222 
223  /* All processes should have the same error code */
224  Teuchos::broadcast(*(this->getComm()), 0, &ierr);
225 
226  TEUCHOS_TEST_FOR_EXCEPTION( ierr > 0,
227  std::runtime_error,
228  "Encountered zero diag element at: " << ierr);
229  TEUCHOS_TEST_FOR_EXCEPTION( ierr == -1,
230  std::runtime_error,
231  "Could not alloc needed working memory for solve" );
232 
233  {
234 #ifdef HAVE_AMESOS2_TIMERS
235  Teuchos::TimeMonitor redistTimer(this->timers_.vecRedistTime_);
236 #endif
237 
238  if ( is_contiguous_ == true ) {
239  Util::put_1d_data_helper_kokkos_view<
240  MultiVecAdapter<Vector>,host_solve_array_t>::do_put(X, xValues_,
241  as<size_t>(ld_rhs),
242  ROOTED);
243  }
244  else {
245  Util::put_1d_data_helper_kokkos_view<
246  MultiVecAdapter<Vector>,host_solve_array_t>::do_put(X, xValues_,
247  as<size_t>(ld_rhs),
248  CONTIGUOUS_AND_ROOTED);
249  }
250  }
251 
252  return(ierr);
253 }
254 
255 
256 template <class Matrix, class Vector>
257 bool
259 {
260  // The Basker can only handle square for right now
261  return( this->globalNumRows_ == this->globalNumCols_ );
262 }
263 
264 
265 template <class Matrix, class Vector>
266 void
267 Basker<Matrix,Vector>::setParameters_impl(const Teuchos::RCP<Teuchos::ParameterList> & parameterList )
268 {
269  using Teuchos::RCP;
270  using Teuchos::getIntegralValue;
271  using Teuchos::ParameterEntryValidator;
272 
273  RCP<const Teuchos::ParameterList> valid_params = getValidParameters_impl();
274 
275  if(parameterList->isParameter("IsContiguous"))
276  {
277  is_contiguous_ = parameterList->get<bool>("IsContiguous");
278  }
279 
280 }
281 
282 template <class Matrix, class Vector>
283 Teuchos::RCP<const Teuchos::ParameterList>
285 {
286  using Teuchos::ParameterList;
287 
288  static Teuchos::RCP<const Teuchos::ParameterList> valid_params;
289 
290  if( is_null(valid_params) ){
291  Teuchos::RCP<Teuchos::ParameterList> pl = Teuchos::parameterList();
292 
293  pl->set("IsContiguous", true, "Are GIDs contiguous");
294  pl->set("alnnz", 2, "Approx number of nonzeros in L, default is 2*nnz(A)");
295  pl->set("aunnx", 2, "Approx number of nonzeros in I, default is 2*nnz(U)");
296  valid_params = pl;
297  }
298  return valid_params;
299 }
300 
301 
302 template <class Matrix, class Vector>
303 bool
305 {
306  using Teuchos::as;
307  if(current_phase == SOLVE) return (false);
308 
309  #ifdef HAVE_AMESOS2_TIMERS
310  Teuchos::TimeMonitor convTimer(this->timers_.mtxConvTime_);
311  #endif
312 
313  // Only the root image needs storage allocated
314  if( this->root_ ){
315  host_nzvals_view_ = host_value_type_array(
316  Kokkos::ViewAllocateWithoutInitializing("host_nzvals_view_"), this->globalNumNonZeros_);
317  host_rows_view_ = host_ordinal_type_array(
318  Kokkos::ViewAllocateWithoutInitializing("host_rows_view_"), this->globalNumNonZeros_);
319  host_col_ptr_view_ = host_ordinal_type_array(
320  Kokkos::ViewAllocateWithoutInitializing("host_col_ptr_view_"), this->globalNumRows_ + 1);
321  }
322 
323  local_ordinal_type nnz_ret = 0;
324  {
325  #ifdef HAVE_AMESOS2_TIMERS
326  Teuchos::TimeMonitor mtxRedistTimer( this->timers_.mtxRedistTime_ );
327  #endif
328 
329  if ( is_contiguous_ == true ) {
330  Util::get_ccs_helper_kokkos_view<
331  MatrixAdapter<Matrix>,host_value_type_array,host_ordinal_type_array,host_ordinal_type_array>
332  ::do_get(this->matrixA_.ptr(), host_nzvals_view_, host_rows_view_, host_col_ptr_view_,
333  nnz_ret, ROOTED, ARBITRARY, this->rowIndexBase_);
334  }
335  else {
336  Util::get_ccs_helper_kokkos_view<
337  MatrixAdapter<Matrix>,host_value_type_array,host_ordinal_type_array,host_ordinal_type_array>
338  ::do_get(this->matrixA_.ptr(), host_nzvals_view_, host_rows_view_, host_col_ptr_view_,
339  nnz_ret, CONTIGUOUS_AND_ROOTED, ARBITRARY, this->rowIndexBase_);
340  }
341  }
342 
343  if( this->root_ ){
344  TEUCHOS_TEST_FOR_EXCEPTION( nnz_ret != as<local_ordinal_type>(this->globalNumNonZeros_),
345  std::runtime_error,
346  "Amesos2_Basker loadA_impl: Did not get the expected number of non-zero vals");
347  }
348  return true;
349 }
350 
351 
352 template<class Matrix, class Vector>
353 const char* Basker<Matrix,Vector>::name = "Basker";
354 
355 
356 } // end namespace Amesos2
357 
358 #endif // AMESOS2_Basker_DEF_HPP
EPhase
Used to indicate a phase in the direct solution.
Definition: Amesos2_TypeDecl.hpp:65
bool loadA_impl(EPhase current_phase)
Reads matrix data into internal structures.
Definition: Amesos2_Basker_def.hpp:304
Teuchos::RCP< const Teuchos::ParameterList > getValidParameters_impl() const
Definition: Amesos2_Basker_def.hpp:284
Amesos2 interface to the Baker package.
Definition: Amesos2_Basker_decl.hpp:73
Amesos2 Basker declarations.
bool single_proc_optimization() const
can we optimize size_type and ordinal_type for straight pass through,
Definition: Amesos2_Basker_def.hpp:85
A Matrix adapter interface for Amesos2.
Definition: Amesos2_MatrixAdapter_decl.hpp:76
bool matrixShapeOK_impl() const
Determines whether the shape of the matrix is OK for this solver.
Definition: Amesos2_Basker_def.hpp:258
int preOrdering_impl()
Performs pre-ordering on the matrix to increase efficiency.
Definition: Amesos2_Basker_def.hpp:91
int numericFactorization_impl()
Basker specific numeric factorization.
Definition: Amesos2_Basker_def.hpp:114
A templated MultiVector class adapter for Amesos2.
Definition: Amesos2_MultiVecAdapter_decl.hpp:176
int solve_impl(const Teuchos::Ptr< MultiVecAdapter< Vector > > X, const Teuchos::Ptr< const MultiVecAdapter< Vector > > B) const
Basker specific solve.
Definition: Amesos2_Basker_def.hpp:166