Panzer  Version of the Day
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
Panzer_STK_SetupLOWSFactory.cpp
Go to the documentation of this file.
1 // @HEADER
2 // *****************************************************************************
3 // Panzer: A partial differential equation assembly
4 // engine for strongly coupled complex multiphysics systems
5 //
6 // Copyright 2011 NTESS and the Panzer contributors.
7 // SPDX-License-Identifier: BSD-3-Clause
8 // *****************************************************************************
9 // @HEADER
10 
11 #include "PanzerAdaptersSTK_config.hpp"
12 
13 #include "Panzer_STK_SetupLOWSFactory.hpp"
14 #include "Panzer_STK_ParameterListCallback.hpp"
15 #include "Panzer_STK_ParameterListCallbackBlocked.hpp"
16 
17 #include "Teuchos_AbstractFactoryStd.hpp"
18 
19 #include "Stratimikos_DefaultLinearSolverBuilder.hpp"
20 
21 #ifdef PANZER_HAVE_EPETRA_STACK
22 #include "Epetra_MpiComm.h"
23 #include "Epetra_Vector.h"
24 #include "EpetraExt_VectorOut.h"
25 #endif // PANZER_HAVE_EPETRA_STACK
26 
27 #include "Tpetra_Map.hpp"
28 #include "Tpetra_MultiVector.hpp"
29 
30 #ifdef PANZER_HAVE_TEKO
31 #include "Teko_StratimikosFactory.hpp"
32 #endif
33 
34 #ifdef PANZER_HAVE_MUELU
35 #include "Stratimikos_MueLuHelpers.hpp"
36 //#include "MatrixMarket_Tpetra.hpp"
37 #include "Xpetra_MapFactory.hpp"
38 #include "Xpetra_MultiVectorFactory.hpp"
39 #endif
40 
41 namespace panzer_stk {
42 
43 namespace {
44 
45  bool
46  determineCoordinateField(const panzer::GlobalIndexer & globalIndexer,std::string & fieldName)
47  {
48  std::vector<std::string> elementBlocks;
49  globalIndexer.getElementBlockIds(elementBlocks);
50 
51  // grab fields for first block
52  std::set<int> runningFields;
53  {
54  const std::vector<int> & fields = globalIndexer.getBlockFieldNumbers(elementBlocks[0]);
55  runningFields.insert(fields.begin(),fields.end());
56  }
57 
58  // grab fields for first block
59  for(std::size_t i=1;i<elementBlocks.size();i++) {
60  const std::vector<int> & fields = globalIndexer.getBlockFieldNumbers(elementBlocks[i]);
61 
62  std::set<int> currentFields(runningFields);
63  runningFields.clear();
64  std::set_intersection(fields.begin(),fields.end(),
65  currentFields.begin(),currentFields.end(),
66  std::inserter(runningFields,runningFields.begin()));
67  }
68 
69  if(runningFields.size()<1)
70  return false;
71 
72  fieldName = globalIndexer.getFieldString(*runningFields.begin());
73  return true;
74  }
75 
76  void
77  fillFieldPatternMap(const panzer::DOFManager & globalIndexer,
78  const std::string & fieldName,
79  std::map<std::string,Teuchos::RCP<const panzer::Intrepid2FieldPattern> > & fieldPatterns)
80  {
81  std::vector<std::string> elementBlocks;
82  globalIndexer.getElementBlockIds(elementBlocks);
83 
84  for(std::size_t e=0;e<elementBlocks.size();e++) {
85  std::string blockId = elementBlocks[e];
86 
87  if(globalIndexer.fieldInBlock(fieldName,blockId))
88  fieldPatterns[blockId] =
89  Teuchos::rcp_dynamic_cast<const panzer::Intrepid2FieldPattern>(globalIndexer.getFieldPattern(blockId,fieldName),true);
90  }
91  }
92 
93  void
94  fillFieldPatternMap(const panzer::GlobalIndexer & globalIndexer,
95  const std::string & fieldName,
96  std::map<std::string,Teuchos::RCP<const panzer::Intrepid2FieldPattern> > & fieldPatterns)
97  {
98  using Teuchos::Ptr;
99  using Teuchos::ptrFromRef;
100  using Teuchos::ptr_dynamic_cast;
101  using panzer::DOFManager;
102 
103  // first standard dof manager
104  {
105  Ptr<const DOFManager> dofManager = ptr_dynamic_cast<const DOFManager>(ptrFromRef(globalIndexer));
106 
107  if(dofManager!=Teuchos::null) {
108  fillFieldPatternMap(*dofManager,fieldName,fieldPatterns);
109  return;
110  }
111  }
112  }
113 } // end anonymous namespace
114 
115  Teuchos::RCP<Thyra::LinearOpWithSolveFactoryBase<double> >
116  buildLOWSFactory(bool blockedAssembly,
117  const Teuchos::RCP<const panzer::GlobalIndexer> & globalIndexer,
118  const Teuchos::RCP<panzer_stk::STKConnManager> & stkConn_manager,
119  int spatialDim,
120  const Teuchos::RCP<const Teuchos::MpiComm<int> > & mpi_comm,
121  const Teuchos::RCP<Teuchos::ParameterList> & strat_params,
122  #ifdef PANZER_HAVE_TEKO
123  const Teuchos::RCP<Teko::RequestHandler> & reqHandler,
124  #endif
125  bool writeCoordinates,
126  bool writeTopo,
127  const Teuchos::RCP<const panzer::GlobalIndexer> & auxGlobalIndexer,
128  bool useCoordinates
129  )
130  {
131  using Teuchos::RCP;
132  using Teuchos::rcp;
133  using Teuchos::rcp_dynamic_cast;
134 
135  Stratimikos::DefaultLinearSolverBuilder linearSolverBuilder;
136 
137  // Note if you want to use new solvers within Teko they have to be added to the solver builer
138  // before teko is added. This is because Teko steals its defaults from the solver its being injected
139  // into!
140 
141  #ifdef PANZER_HAVE_MUELU
142  {
143  Stratimikos::enableMueLu<double,int,panzer::GlobalOrdinal,panzer::TpetraNodeType>(linearSolverBuilder,"MueLu");
144  Stratimikos::enableMueLuRefMaxwell<double,int,panzer::GlobalOrdinal,panzer::TpetraNodeType>(linearSolverBuilder,"MueLuRefMaxwell");
145  Stratimikos::enableMueLuMaxwell1<double,int,panzer::GlobalOrdinal,panzer::TpetraNodeType>(linearSolverBuilder,"MueLuMaxwell1");
146  #ifndef PANZER_HIDE_DEPRECATED_CODE
147  // the next two are only for backwards compatibility
148  Stratimikos::enableMueLu<double,int,panzer::GlobalOrdinal,panzer::TpetraNodeType>(linearSolverBuilder,"MueLu-Tpetra");
149  Stratimikos::enableMueLuRefMaxwell<double,int,panzer::GlobalOrdinal,panzer::TpetraNodeType>(linearSolverBuilder,"MueLuRefMaxwell-Tpetra");
150  #endif
151  }
152  #endif // MUELU
153 
154  #ifdef PANZER_HAVE_TEKO
155  RCP<Teko::RequestHandler> reqHandler_local = reqHandler;
156 
157  if(!blockedAssembly) {
158 
159  std::string fieldName;
160 
161  // try to set request handler from member variable; This is a potential segfault
162  // if its internally stored data (e.g. callback) gets released and all its data
163  // required by ML or whatever gets hosed
164  if(reqHandler_local==Teuchos::null)
165  reqHandler_local = rcp(new Teko::RequestHandler);
166 
167  // add in the coordinate parameter list callback handler
168  if(determineCoordinateField(*globalIndexer,fieldName)) {
169  std::map<std::string,RCP<const panzer::Intrepid2FieldPattern> > fieldPatterns;
170  fillFieldPatternMap(*globalIndexer,fieldName,fieldPatterns);
171 
172  RCP<panzer_stk::ParameterListCallback> callback = rcp(new
173  panzer_stk::ParameterListCallback(fieldName,fieldPatterns,stkConn_manager,
174  rcp_dynamic_cast<const panzer::GlobalIndexer>(globalIndexer)));
175  reqHandler_local->addRequestCallback(callback);
176 
177  // determine if you want rigid body null space modes...currently an extremely specialized case!
178  if(strat_params->sublist("Preconditioner Types").isSublist("ML")) {
179 /* COMMENTING THIS OUT FOR NOW, this is causing problems with some of the preconditioners in optimization...not sure why
180 
181  Teuchos::ParameterList & ml_params = strat_params->sublist("Preconditioner Types").sublist("ML").sublist("ML Settings");
182 
183  {
184  // force parameterlistcallback to build coordinates
185  callback->preRequest(Teko::RequestMesg(rcp(new Teuchos::ParameterList())));
186 
187  // extract coordinate vectors
188  std::vector<double> & xcoords = const_cast<std::vector<double> & >(callback->getXCoordsVector());
189  std::vector<double> & ycoords = const_cast<std::vector<double> & >(callback->getYCoordsVector());
190  std::vector<double> & zcoords = const_cast<std::vector<double> & >(callback->getZCoordsVector());
191 
192  ml_params.set<double*>("x-coordinates",&xcoords[0]);
193  ml_params.set<double*>("y-coordinates",&ycoords[0]);
194  ml_params.set<double*>("z-coordinates",&zcoords[0]);
195  }
196 */
197 /*
198  bool useRigidBodyNullSpace = false;
199  if(ml_params.isType<std::string>("null space: type"))
200  useRigidBodyNullSpace = ml_params.get<std::string>("null space: type") == "pre-computed";
201 
202  if(useRigidBodyNullSpace) {
203  // force parameterlistcallback to build coordinates
204  callback->preRequest(Teko::RequestMesg(rcp(new Teuchos::ParameterList())));
205 
206  RCP<std::vector<double> > rbm = rcp(new std::vector<double>);
207  std::vector<double> & rbm_ref = *rbm;
208 
209  // extract coordinate vectors
210  std::vector<double> & xcoords = const_cast<std::vector<double> & >(callback->getXCoordsVector());
211  std::vector<double> & ycoords = const_cast<std::vector<double> & >(callback->getYCoordsVector());
212  std::vector<double> & zcoords = const_cast<std::vector<double> & >(callback->getZCoordsVector());
213 
214  // use ML to build the null space modes for ML
215  int Nnodes = Teuchos::as<int>(xcoords.size());
216  int NscalarDof = 0;
217  int Ndof = spatialDim;
218  int nRBM = spatialDim==3 ? 6 : (spatialDim==2 ? 3 : 1);
219  int rbmSize = Nnodes*(nRBM+NscalarDof)*(Ndof+NscalarDof);
220  rbm_ref.resize(rbmSize);
221 
222  ML_Coord2RBM(Nnodes,&xcoords[0],&ycoords[0],&zcoords[0],&rbm_ref[0],Ndof,NscalarDof);
223 
224  ml_params.set<double*>("null space: vectors",&rbm_ref[0]);
225  ml_params.set<int>("null space: dimension",nRBM);
226 
227  callback->storeExtraVector(rbm);
228  }
229 */
230  }
231 
232  if(writeCoordinates) {
233 #ifdef PANZER_HAVE_EPETRA_STACK
234  // force parameterlistcallback to build coordinates
235  callback->preRequest(Teko::RequestMesg(rcp(new Teuchos::ParameterList())));
236 
237  // extract coordinate vectors
238  const std::vector<double> & xcoords = callback->getXCoordsVector();
239  const std::vector<double> & ycoords = callback->getYCoordsVector();
240  const std::vector<double> & zcoords = callback->getZCoordsVector();
241 
242  // use epetra to write coordinates to matrix market files
243  Epetra_MpiComm ep_comm(*mpi_comm->getRawMpiComm()); // this is OK access to RawMpiComm becase its declared on the stack?
244  // and all users of this object are on the stack (within scope of mpi_comm
245  Epetra_Map map(-1,xcoords.size(),0,ep_comm);
246 
247  RCP<Epetra_Vector> vec;
248  switch(spatialDim) {
249  case 3:
250  vec = rcp(new Epetra_Vector(Copy,map,const_cast<double *>(&zcoords[0])));
251  EpetraExt::VectorToMatrixMarketFile("zcoords.mm",*vec);
252  // Intentional fall-through.
253  case 2:
254  vec = rcp(new Epetra_Vector(Copy,map,const_cast<double *>(&ycoords[0])));
255  EpetraExt::VectorToMatrixMarketFile("ycoords.mm",*vec);
256  // Intentional fall-through.
257  case 1:
258  vec = rcp(new Epetra_Vector(Copy,map,const_cast<double *>(&xcoords[0])));
259  EpetraExt::VectorToMatrixMarketFile("xcoords.mm",*vec);
260  break;
261  default:
262  TEUCHOS_ASSERT(false);
263  }
264 #else
265  TEUCHOS_TEST_FOR_EXCEPTION(true,std::runtime_error,"ERROR: Panzer_STK_SetupLOWSFactory.cpp - writeCoordinates not implemented for Tpetra yet!");
266 #endif
267  }
268 
269 #ifdef PANZER_HAVE_MUELU
270  if(rcp_dynamic_cast<const panzer::GlobalIndexer>(globalIndexer)!=Teuchos::null
271  && useCoordinates) {
272  if(!writeCoordinates)
273  callback->preRequest(Teko::RequestMesg(rcp(new Teuchos::ParameterList())));
274 
275  typedef Tpetra::Map<int,panzer::GlobalOrdinal,panzer::TpetraNodeType> Map;
276  typedef Tpetra::MultiVector<double,int,panzer::GlobalOrdinal,panzer::TpetraNodeType> MV;
277 
278  // extract coordinate vectors and modify strat_params to include coordinate vectors
279  unsigned dim = Teuchos::as<unsigned>(spatialDim);
280  RCP<MV> coords;
281  for(unsigned d=0;d<dim;d++) {
282  const std::vector<double> & coord = callback->getCoordsVector(d);
283 
284  // no coords vector has been build yet, build one
285  if(coords==Teuchos::null) {
286  if(globalIndexer->getNumFields()==1) {
287  RCP<const panzer::GlobalIndexer> ugi
288  = rcp_dynamic_cast<const panzer::GlobalIndexer>(globalIndexer);
289  std::vector<panzer::GlobalOrdinal> ownedIndices;
290  ugi->getOwnedIndices(ownedIndices);
291  RCP<const Map> coords_map = rcp(new Map(Teuchos::OrdinalTraits<panzer::GlobalOrdinal>::invalid(),ownedIndices,0,mpi_comm));
292  coords = rcp(new MV(coords_map,dim));
293  }
294  else {
295  RCP<const Map> coords_map = rcp(new Map(Teuchos::OrdinalTraits<panzer::GlobalOrdinal>::invalid(),coord.size(),0,mpi_comm));
296  coords = rcp(new MV(coords_map,dim));
297  }
298  }
299 
300  // sanity check the size
301  TEUCHOS_ASSERT(coords->getLocalLength()==coord.size());
302 
303  // fill appropriate coords vector
304  Teuchos::ArrayRCP<double> dest = coords->getDataNonConst(d);
305  for(std::size_t i=0;i<coord.size();i++)
306  dest[i] = coord[i];
307  }
308 
309  // inject coordinates into parameter list
310  Teuchos::ParameterList & muelu_params = strat_params->sublist("Preconditioner Types").sublist("MueLu");
311  muelu_params.set<RCP<MV> >("Coordinates",coords);
312  }
313  #endif
314  }
315  // else write_out_the_mesg("Warning: No unique field determines the coordinates, coordinates unavailable!")
316 
317  Teko::addTekoToStratimikosBuilder(linearSolverBuilder,reqHandler_local);
318  }
319  else {
320  // try to set request handler from member variable
321  if(reqHandler_local==Teuchos::null)
322  reqHandler_local = rcp(new Teko::RequestHandler);
323 
324  std::string fieldName;
325  if(determineCoordinateField(*globalIndexer,fieldName)) {
326  RCP<const panzer::BlockedDOFManager> blkDofs =
327  rcp_dynamic_cast<const panzer::BlockedDOFManager>(globalIndexer);
328  RCP<const panzer::BlockedDOFManager> auxBlkDofs =
329  rcp_dynamic_cast<const panzer::BlockedDOFManager>(auxGlobalIndexer);
330  RCP<panzer_stk::ParameterListCallbackBlocked> callback =
331  rcp(new panzer_stk::ParameterListCallbackBlocked(stkConn_manager,blkDofs,auxBlkDofs));
332  reqHandler_local->addRequestCallback(callback);
333  }
334 
335  Teko::addTekoToStratimikosBuilder(linearSolverBuilder,reqHandler_local);
336 
337  if(writeCoordinates) {
338 #ifdef PANZER_HAVE_EPETRA_STACK
339  RCP<const panzer::BlockedDOFManager> blkDofs =
340  rcp_dynamic_cast<const panzer::BlockedDOFManager>(globalIndexer);
341 
342  // loop over blocks
343  const std::vector<RCP<panzer::GlobalIndexer>> & dofVec
344  = blkDofs->getFieldDOFManagers();
345  for(std::size_t i=0;i<dofVec.size();i++) {
346 
347  // add in the coordinate parameter list callback handler
348  TEUCHOS_ASSERT(determineCoordinateField(*dofVec[i],fieldName));
349 
350  std::map<std::string,RCP<const panzer::Intrepid2FieldPattern> > fieldPatterns;
351  fillFieldPatternMap(*dofVec[i],fieldName,fieldPatterns);
352  panzer_stk::ParameterListCallback plCall(fieldName,fieldPatterns,stkConn_manager,dofVec[i]);
353  plCall.buildArrayToVector();
354  plCall.buildCoordinates();
355 
356  // extract coordinate vectors
357  const std::vector<double> & xcoords = plCall.getXCoordsVector();
358  const std::vector<double> & ycoords = plCall.getYCoordsVector();
359  const std::vector<double> & zcoords = plCall.getZCoordsVector();
360 
361  // use epetra to write coordinates to matrix market files
362  Epetra_MpiComm ep_comm(*mpi_comm->getRawMpiComm()); // this is OK access to RawMpiComm becase its declared on the stack?
363  // and all users of this object are on the stack (within scope of mpi_comm
364  Epetra_Map map(-1,xcoords.size(),0,ep_comm);
365 
366  RCP<Epetra_Vector> vec;
367  switch(spatialDim) {
368  case 3:
369  vec = rcp(new Epetra_Vector(Copy,map,const_cast<double *>(&zcoords[0])));
370  EpetraExt::VectorToMatrixMarketFile((fieldName+"_zcoords.mm").c_str(),*vec);
371  // Intentional fall-through.
372  case 2:
373  vec = rcp(new Epetra_Vector(Copy,map,const_cast<double *>(&ycoords[0])));
374  EpetraExt::VectorToMatrixMarketFile((fieldName+"_ycoords.mm").c_str(),*vec);
375  // Intentional fall-through.
376  case 1:
377  vec = rcp(new Epetra_Vector(Copy,map,const_cast<double *>(&xcoords[0])));
378  EpetraExt::VectorToMatrixMarketFile((fieldName+"_xcoords.mm").c_str(),*vec);
379  break;
380  default:
381  TEUCHOS_ASSERT(false);
382  }
383 
384  // TODO add MueLu code...
385  #ifdef PANZER_HAVE_MUELU
386  if(useCoordinates) {
387 
388  typedef Xpetra::Map<int,panzer::GlobalOrdinal> Map;
389  typedef Xpetra::MultiVector<double,int,panzer::GlobalOrdinal> MV;
390 
391  // TODO This is Epetra-specific
392  RCP<const Map> coords_map = Xpetra::MapFactory<int,panzer::GlobalOrdinal>::Build(Xpetra::UseEpetra,
393  Teuchos::OrdinalTraits<panzer::GlobalOrdinal>::invalid(),
394  //Teuchos::ArrayView<GO>(ownedIndices),
395  xcoords.size(),
396  0,
397  mpi_comm
398  );
399 
400  unsigned dim = Teuchos::as<unsigned>(spatialDim);
401 
402  RCP<MV> coords = Xpetra::MultiVectorFactory<double,int,panzer::GlobalOrdinal>::Build(coords_map,spatialDim);
403 
404  for(unsigned d=0;d<dim;d++) {
405  // sanity check the size
406  TEUCHOS_ASSERT(coords->getLocalLength()==xcoords.size());
407 
408  // fill appropriate coords vector
409  Teuchos::ArrayRCP<double> dest = coords->getDataNonConst(d);
410  for(std::size_t j=0;j<coords->getLocalLength();++j) {
411  if (d == 0) dest[j] = xcoords[j];
412  if (d == 1) dest[j] = ycoords[j];
413  if (d == 2) dest[j] = zcoords[j];
414  }
415  }
416 
417  // TODO This is Epetra-specific
418  // inject coordinates into parameter list
419  Teuchos::ParameterList & muelu_params = strat_params->sublist("Preconditioner Types").sublist("MueLu");
420  muelu_params.set<RCP<MV> >("Coordinates",coords);
421 
422  }
423  #endif
424 
425  } /* end loop over all physical fields */
426 #else // PANZER_HAVE EPETRA
427  TEUCHOS_TEST_FOR_EXCEPTION(true,std::runtime_error,"ERROR: Panzer_STK_SetupLOWSFactory - writeCoordinates not implemented for Tpetra yet!")
428 #endif
429  }
430 
431  if(writeTopo) {
432  /*
433  RCP<const panzer::BlockedDOFManager> blkDofs =
434  rcp_dynamic_cast<const panzer::BlockedDOFManager>(globalIndexer);
435 
436  writeTopology(*blkDofs);
437  */
438  TEUCHOS_TEST_FOR_EXCEPTION(true,std::logic_error,
439  "Topology writing is no longer implemented. It needs to be reimplemented for the "
440  "default DOFManager (estimate 2 days with testing)");
441  }
442  }
443  #endif
444 
445  linearSolverBuilder.setParameterList(strat_params);
446  RCP<Thyra::LinearOpWithSolveFactoryBase<double> > lowsFactory = createLinearSolveStrategy(linearSolverBuilder);
447 
448  return lowsFactory;
449  }
450 
451 
452  Teuchos::RCP<Thyra::LinearOpWithSolveFactoryBase<double> >
453  buildLOWSFactory(bool blockedAssembly,
454  const Teuchos::RCP<const panzer::GlobalIndexer> & globalIndexer,
455  const Teuchos::RCP<panzer::ConnManager> & conn_manager,
456  int spatialDim,
457  const Teuchos::RCP<const Teuchos::MpiComm<int> > & mpi_comm,
458  const Teuchos::RCP<Teuchos::ParameterList> & strat_params,
459  #ifdef PANZER_HAVE_TEKO
460  const Teuchos::RCP<Teko::RequestHandler> & reqHandler,
461  #endif
462  bool writeCoordinates,
463  bool writeTopo,
464  const Teuchos::RCP<const panzer::GlobalIndexer> & auxGlobalIndexer,
465  bool useCoordinates
466  )
467  {
468  #ifdef PANZER_HAVE_TEKO
469  Teuchos::RCP<Teko::RequestHandler> reqHandler_local = reqHandler;
470  if(reqHandler_local==Teuchos::null)
471  reqHandler_local = Teuchos::rcp(new Teko::RequestHandler);
472  #endif
473 
474  auto stk_conn_manager = Teuchos::rcp_dynamic_cast<panzer_stk::STKConnManager>(conn_manager,true);
475 
476  return buildLOWSFactory(blockedAssembly,globalIndexer,stk_conn_manager,spatialDim,mpi_comm,strat_params,
477 #ifdef PANZER_HAVE_TEKO
478  reqHandler_local,
479 #endif
480  writeCoordinates,
481  writeTopo,
482  auxGlobalIndexer,
483  useCoordinates
484  );
485 
486  // should never reach this
487  TEUCHOS_ASSERT(false);
488  return Teuchos::null;
489  }
490 }
panzer::DOFManager::fieldInBlock
bool fieldInBlock(const std::string &field, const std::string &block) const
Definition: Panzer_DOFManager.cpp:969
panzer::GlobalIndexer::getFieldString
virtual const std::string & getFieldString(int num) const =0
Reverse lookup of the field string from a field number.
Epetra_Map
panzer::DOFManager::getElementBlockIds
void getElementBlockIds(std::vector< std::string > &elementBlockIds) const
Definition: Panzer_DOFManager.hpp:211
Panzer_STK_ParameterListCallbackBlocked.hpp
TEUCHOS_TEST_FOR_EXCEPTION
#define TEUCHOS_TEST_FOR_EXCEPTION(throw_exception_test, Exception, msg)
panzer::BlockedDOFManager::getFieldDOFManagers
const std::vector< Teuchos::RCP< GlobalIndexer > > & getFieldDOFManagers() const
Definition: Panzer_BlockedDOFManager.hpp:405
Epetra_Vector
Teuchos::ParameterList::set
ParameterList & set(std::string const &name, T &&value, std::string const &docString="", RCP< const ParameterEntryValidator > const &validator=null)
panzer::GlobalIndexer::getElementBlockIds
virtual void getElementBlockIds(std::vector< std::string > &elementBlockIds) const =0
Epetra_MpiComm
panzer::GlobalIndexer::getOwnedIndices
virtual void getOwnedIndices(std::vector< panzer::GlobalOrdinal > &indices) const =0
Get the set of indices owned by this processor.
panzer::GlobalIndexer::getNumFields
virtual int getNumFields() const =0
Teuchos::rcp
TEUCHOS_DEPRECATED RCP< T > rcp(T *p, Dealloc_T dealloc, bool owns_mem)
Teuchos::ParameterList::isSublist
bool isSublist(const std::string &name) const
Panzer_STK_SetupLOWSFactory.hpp
panzer_stk::buildLOWSFactory
Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< double > > buildLOWSFactory(bool blockedAssembly, const Teuchos::RCP< const panzer::GlobalIndexer > &globalIndexer, const Teuchos::RCP< panzer_stk::STKConnManager > &stkConn_manager, int spatialDim, const Teuchos::RCP< const Teuchos::MpiComm< int > > &mpi_comm, const Teuchos::RCP< Teuchos::ParameterList > &strat_params, bool writeCoordinates, bool writeTopo, const Teuchos::RCP< const panzer::GlobalIndexer > &auxGlobalIndexer, bool useCoordinates)
Definition: Panzer_STK_SetupLOWSFactory.cpp:116
EpetraExt::VectorToMatrixMarketFile
int VectorToMatrixMarketFile(const char *filename, const Epetra_Vector &A, const char *matrixName=0, const char *matrixDescription=0, bool writeHeader=true)
panzer_stk::STKConnManager
Definition: Panzer_STKConnManager.hpp:30
panzer::GlobalIndexer::getBlockFieldNumbers
virtual const std::vector< int > & getBlockFieldNumbers(const std::string &blockId) const =0
Teuchos::ParameterList::sublist
ParameterList & sublist(const std::string &name, bool mustAlreadyExist=false, const std::string &docString="")
TEUCHOS_ASSERT
#define TEUCHOS_ASSERT(assertion_test)
EpetraExt_VectorOut.h
panzer::DOFManager::getFieldPattern
Teuchos::RCP< const FieldPattern > getFieldPattern(const std::string &name) const
Find a field pattern stored for a particular block and field number. This will retrive the pattern ad...
Definition: Panzer_DOFManager.cpp:218
Panzer_STK_ParameterListCallback.hpp
Generated on Fri Dec 20 2024 09:16:52 for Panzer by   doxygen 1.8.5