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Xpetra_CrsMatrixWrap_decl.hpp
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46 
47 // WARNING: This code is experimental. Backwards compatibility should not be expected.
48 
49 #ifndef XPETRA_CRSMATRIXWRAP_DECL_HPP
50 #define XPETRA_CRSMATRIXWRAP_DECL_HPP
51 
52 #include <Kokkos_DefaultNode.hpp>
53 
54 #include "Xpetra_ConfigDefs.hpp"
55 #include "Xpetra_Exceptions.hpp"
56 
57 #include "Xpetra_MultiVector.hpp"
58 #include "Xpetra_CrsGraph.hpp"
59 #include "Xpetra_CrsMatrix.hpp"
61 
62 #include "Xpetra_Matrix.hpp"
63 
65 #include <Teuchos_Hashtable.hpp>
66 
71 namespace Xpetra {
72 
73  typedef std::string viewLabel_t;
74 
79 template <class Scalar,
80  class LocalOrdinal,
81  class GlobalOrdinal,
83 class CrsMatrixWrap :
84  public Matrix<Scalar,LocalOrdinal,GlobalOrdinal,Node>
85 {
90 #ifdef HAVE_XPETRA_TPETRA
92 #endif
95 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
96 #ifdef HAVE_XPETRA_TPETRA
97  typedef typename CrsMatrix::local_matrix_type local_matrix_type;
98 #endif
99 #endif
100 
101 public:
103 
104 
106  CrsMatrixWrap (const RCP<const Map>& rowMap,
107  size_t maxNumEntriesPerRow,
109 
111  CrsMatrixWrap (const RCP<const Map>& rowMap,
112  const ArrayRCP<const size_t>& NumEntriesPerRowToAlloc,
114 
116  CrsMatrixWrap(const RCP<const Map> &rowMap, const RCP<const Map>& colMap, size_t maxNumEntriesPerRow, Xpetra::ProfileType pftype = Xpetra::DynamicProfile);
117 
119  CrsMatrixWrap(const RCP<const Map> &rowMap, const RCP<const Map>& colMap, const ArrayRCP<const size_t> &NumEntriesPerRowToAlloc, Xpetra::ProfileType pftype = Xpetra::DynamicProfile);
120 
121 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
122 #ifdef HAVE_XPETRA_TPETRA
123  CrsMatrixWrap(const RCP<const Map> &rowMap, const RCP<const Map>& colMap, const local_matrix_type& lclMatrix, const Teuchos::RCP<Teuchos::ParameterList>& params = null);
125 
127  CrsMatrixWrap(const local_matrix_type& lclMatrix, const RCP<const Map> &rowMap, const RCP<const Map>& colMap,
128  const RCP<const Map>& domainMap = Teuchos::null, const RCP<const Map>& rangeMap = Teuchos::null,
129  const Teuchos::RCP<Teuchos::ParameterList>& params = null);
130 #else
131 #ifdef __GNUC__
132 #warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
133 #endif
134 #endif
135 #endif
136 
138 
139  CrsMatrixWrap(const RCP<const CrsGraph>& graph, const RCP<ParameterList>& paramList = Teuchos::null);
140 
142  virtual ~CrsMatrixWrap();
143 
145 
146 
148 
149 
151 
162  void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView<const GlobalOrdinal> &cols, const ArrayView<const Scalar> &vals);
163 
165 
172  void insertLocalValues(LocalOrdinal localRow, const ArrayView<const LocalOrdinal> &cols, const ArrayView<const Scalar> &vals);
173 
175 
180  void replaceGlobalValues(GlobalOrdinal globalRow,
181  const ArrayView<const GlobalOrdinal> &cols,
182  const ArrayView<const Scalar> &vals);
183 
185 
188  void replaceLocalValues(LocalOrdinal localRow,
189  const ArrayView<const LocalOrdinal> &cols,
190  const ArrayView<const Scalar> &vals);
191 
193  virtual void setAllToScalar(const Scalar &alpha);
194 
196  void scale(const Scalar &alpha);
197 
199 
201 
202 
211  void resumeFill(const RCP< ParameterList > &params=null);
212 
224  void fillComplete(const RCP<const Map> &domainMap, const RCP<const Map> &rangeMap, const RCP<Teuchos::ParameterList> &params = null);
225 
239  //TODO : Get ride of "Tpetra"::OptimizeOption
240  void fillComplete(const RCP<ParameterList> &params = null);
241 
243 
245 
248 
250 
253 
255  size_t getNodeNumRows() const;
256 
259 
261  size_t getNodeNumEntries() const;
262 
264 
265  size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const;
266 
268 
269  size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const;
270 
272 
274  size_t getGlobalMaxNumRowEntries() const;
275 
277 
279  size_t getNodeMaxNumRowEntries() const;
280 
282  bool isLocallyIndexed() const;
283 
285  bool isGloballyIndexed() const;
286 
288  bool isFillComplete() const;
289 
291 
303  void getLocalRowCopy(LocalOrdinal LocalRow,
304  const ArrayView<LocalOrdinal> &Indices,
305  const ArrayView<Scalar> &Values,
306  size_t &NumEntries
307  ) const;
308 
310 
319  void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView<const GlobalOrdinal> &indices, ArrayView<const Scalar> &values) const;
320 
322 
331  void getLocalRowView(LocalOrdinal LocalRow, ArrayView<const LocalOrdinal> &indices, ArrayView<const Scalar> &values) const;
332 
334 
337 
339  void getLocalDiagOffsets(Teuchos::ArrayRCP<size_t> &offsets) const;
340 
343 
346 
349 
352 
354  bool haveGlobalConstants() const;
355 
357 
359 
360 
362 
371  //TODO virtual=0 // TODO: Add default parameters ?
372 // void multiply(const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> & X, MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &Y, Teuchos::ETransp trans, Scalar alpha, Scalar beta) const {
373 // matrixData_->multiply(X, Y, trans, alpha, beta);
374 // }
375 
377 
379 
380 
382 
388  Scalar alpha = ScalarTraits<Scalar>::one(),
389  Scalar beta = ScalarTraits<Scalar>::zero()) const;
390 
394 
398 
401  const RCP<const Map> & getColMap() const;
402 
404  const RCP<const Map> & getColMap(viewLabel_t viewLabel) const;
405 
407 
409 
411  //{@
412 
415 
417  void doImport(const Matrix &source,
419 
421  void doExport(const Matrix &dest,
423 
425  void doImport(const Matrix &source,
427 
429  void doExport(const Matrix &dest,
431 
432  // @}
433 
435 
436 
438  std::string description() const;
439 
442 
444 
445  void setObjectLabel( const std::string &objectLabel );
447 
448 
449 
450 
451 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
452 #ifdef HAVE_XPETRA_TPETRA
453  local_matrix_type getLocalMatrix () const;
455 #else
456 #ifdef __GNUC__
457 #warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
458 #endif
459 #endif
460 #endif
461 
462  // JG: Added:
463 
464  bool hasCrsGraph() const;
465 
468 
470 
472 #ifdef XPETRA_ENABLE_DEPRECATED_CODE
473  template<class Node2>
474  RCP<Xpetra::Matrix<Scalar,LocalOrdinal,GlobalOrdinal,Node2> > XPETRA_DEPRECATED clone(const RCP<Node2> &node2) const;
475 #endif
476 
477 private:
478 
479  // Default view is created after fillComplete()
480  // Because ColMap might not be available before fillComplete().
481  void CreateDefaultView();
482 
483 private:
484 
485  // The colMap can be <tt>null</tt> until fillComplete() is called. The default view of the Matrix have to be updated when fillComplete() is called.
486  // If CrsMatrix::fillComplete() have been used instead of CrsMatrixWrap::fillComplete(), the default view is updated when getColMap() is called.
487  void updateDefaultView() const;
488  // The boolean finalDefaultView_ keep track of the status of the default view (= already updated or not)
489  // See also CrsMatrixWrap::updateDefaultView()
490  mutable bool finalDefaultView_;
491 
492  // The underlying matrix object
494 
495 }; // class CrsMatrixWrap
496 
497 } // namespace Xpetra
498 
499 #define XPETRA_CRSMATRIXWRAP_SHORT
500 #endif //XPETRA_CRSMATRIXWRAP_DECL_HPP
501 
502 //NOTE: if CrsMatrix and VbrMatrix share a common interface for fillComplete() etc, I can move some stuff in Xpetra_Matrix.hpp
503 //TODO: getUnderlyingMatrix() method
void setObjectLabel(const std::string &objectLabel)
RCP< CrsMatrix > getCrsMatrix() const
RCP< Map< LocalOrdinal, GlobalOrdinal, Node2 > > clone(const Map< LocalOrdinal, GlobalOrdinal, Node1 > &map, const RCP< Node2 > &node2)
void rightScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)
Right scale matrix using the given vector entries.
size_t getNodeMaxNumRowEntries() const
Returns the maximum number of entries across all rows/columns on this node.
bool isGloballyIndexed() const
If matrix indices are in the global range, this function returns true. Otherwise, this function retur...
Xpetra::TpetraCrsMatrix< Scalar, LocalOrdinal, GlobalOrdinal, Node > TpetraCrsMatrix
global_size_t getGlobalNumEntries() const
Returns the global number of entries in this matrix.
void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)
Replace matrix entries, using global IDs.
global_size_t getGlobalNumRows() const
Returns the number of global rows in this matrix.
const Teuchos::RCP< const Xpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > getMap() const
Implements DistObject interface.
bool hasCrsGraph() const
Supports the getCrsGraph() call.
void scale(const Scalar &alpha)
Scale the current values of a matrix, this = alpha*this.
void removeEmptyProcessesInPlace(const Teuchos::RCP< const Map > &newMap)
Xpetra::MatrixView< Scalar, LocalOrdinal, GlobalOrdinal, Node > MatrixView
void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const
Extract a const, non-persisting view of global indices in a specified row of the matrix.
CrsMatrixWrap(const RCP< const Map > &rowMap, size_t maxNumEntriesPerRow, Xpetra::ProfileType pftype=Xpetra::DynamicProfile)
Constructor specifying fixed number of entries for each row.
void doExport(const Matrix &dest, const Xpetra::Import< LocalOrdinal, GlobalOrdinal, Node > &importer, CombineMode CM)
Export.
size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const
Returns the current number of entries on this node in the specified local row.
ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const
Get Frobenius norm of the matrix.
void doImport(const Matrix &source, const Xpetra::Import< LocalOrdinal, GlobalOrdinal, Node > &importer, CombineMode CM)
Import.
std::string description() const
Return a simple one-line description of this object.
void getLocalDiagOffsets(Teuchos::ArrayRCP< size_t > &offsets) const
Get offsets of the diagonal entries in the matrix.
Xpetra::CrsGraph< LocalOrdinal, GlobalOrdinal, Node > CrsGraph
void getLocalDiagCopy(Xpetra::Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag) const
Get a copy of the diagonal entries owned by this node, with local row idices.
size_t getNodeNumEntries() const
Returns the local number of entries in this matrix.
RCP< const CrsGraph > getCrsGraph() const
Returns the CrsGraph associated with this matrix.
void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const
Print the object with some verbosity level to an FancyOStream object.
size_t getGlobalMaxNumRowEntries() const
Returns the maximum number of entries across all rows/columns on all nodes.
std::string viewLabel_t
size_t global_size_t
Global size_t object.
static const EVerbosityLevel verbLevel_default
void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)
Insert matrix entries, using global IDs.
void fillComplete(const RCP< const Map > &domainMap, const RCP< const Map > &rangeMap, const RCP< Teuchos::ParameterList > &params=null)
Signal that data entry is complete, specifying domain and range maps.
bool haveGlobalConstants() const
Returns true if globalConstants have been computed; false otherwise.
virtual ~CrsMatrixWrap()
Destructor.
const RCP< const Map > & getColMap() const
Returns the Map that describes the column distribution in this matrix. This might be null until fillC...
void resumeFill(const RCP< ParameterList > &params=null)
bool isFillComplete() const
Returns true if fillComplete() has been called and the matrix is in compute mode. ...
RCP< const Xpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > getDomainMap() const
Returns the Map associated with the domain of this operator. This will be null until fillComplete() i...
virtual void setAllToScalar(const Scalar &alpha)
Set all matrix entries equal to scalar.
size_t getNodeNumRows() const
Returns the number of matrix rows owned on the calling node.
global_size_t getGlobalNumCols() const
Returns the number of global columns in the matrix.
Xpetra::Map< LocalOrdinal, GlobalOrdinal, Node > Map
void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)
Insert matrix entries, using local IDs.
CombineMode
Xpetra::Combine Mode enumerable type.
void leftScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)
Left scale matrix using the given vector entries.
bool isLocallyIndexed() const
If matrix indices are in the local range, this function returns true. Otherwise, this function return...
Xpetra::CrsMatrix< Scalar, LocalOrdinal, GlobalOrdinal, Node > CrsMatrix
virtual void apply(const Xpetra::MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, Xpetra::MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &Y, Teuchos::ETransp mode=Teuchos::NO_TRANS, Scalar alpha=ScalarTraits< Scalar >::one(), Scalar beta=ScalarTraits< Scalar >::zero()) const
Computes the sparse matrix-multivector multiplication.
size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const
Returns the current number of entries in the specified global row.
Xpetra::Matrix< Scalar, LocalOrdinal, GlobalOrdinal, Node > Matrix
RCP< const Xpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > getRangeMap() const
void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const
Extract a const, non-persisting view of local indices in a specified row of the matrix.
Xpetra::CrsMatrixFactory< Scalar, LocalOrdinal, GlobalOrdinal, Node > CrsMatrixFactory
void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)
Replace matrix entries, using local IDs.
Xpetra-specific matrix class.
void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const
Extract a list of entries in a specified local row of the matrix. Put into storage allocated by calli...