Epetra_CrsMatrix Class Reference

Epetra_CrsMatrix: A class for constructing and using real-valued double-precision sparse compressed row matrices. More...

#include <Epetra_CrsMatrix.h>

Inheritance diagram for Epetra_CrsMatrix:

Collaboration diagram for Epetra_CrsMatrix:

Public Member Functions
void	FusedImport (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Import &RowImporter, const Epetra_Map *DomainMap, const Epetra_Map *RangeMap, bool RestrictCommunicator)
void	FusedExport (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Export &RowExporter, const Epetra_Map *DomainMap, const Epetra_Map *RangeMap, bool RestrictCommunicator)
void	FusedImport (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Import &RowImporter, const Epetra_Import *DomainImporter, const Epetra_Map *DomainMap, const Epetra_Map *RangeMap, bool RestrictCommunicator)
void	FusedExport (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Export &RowExporter, const Epetra_Export *DomainExporter, const Epetra_Map *DomainMap, const Epetra_Map *RangeMap, bool RestrictCommunicator)
Constructors/Destructor
	Epetra_CrsMatrix (Epetra_DataAccess CV, const Epetra_Map &RowMap, const int *NumEntriesPerRow, bool StaticProfile=false)
	Epetra_CrsMatrix constructor with variable number of indices per row. More...
	Epetra_CrsMatrix (Epetra_DataAccess CV, const Epetra_Map &RowMap, int NumEntriesPerRow, bool StaticProfile=false)
	Epetra_CrsMatrix constructor with fixed number of indices per row. More...
	Epetra_CrsMatrix (Epetra_DataAccess CV, const Epetra_Map &RowMap, const Epetra_Map &ColMap, const int *NumEntriesPerRow, bool StaticProfile=false)
	Epetra_CrsMatrix constructor with variable number of indices per row. More...
	Epetra_CrsMatrix (Epetra_DataAccess CV, const Epetra_Map &RowMap, const Epetra_Map &ColMap, int NumEntriesPerRow, bool StaticProfile=false)
	Epetra_CrsMatrix constuctor with fixed number of indices per row. More...
	Epetra_CrsMatrix (Epetra_DataAccess CV, const Epetra_CrsGraph &Graph)
	Construct a matrix using an existing Epetra_CrsGraph object. More...
	Epetra_CrsMatrix (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Import &RowImporter, const Epetra_Map *DomainMap=0, const Epetra_Map *RangeMap=0, bool RestrictCommunicator=false)
	Epetra CrsMatrix constructor that also fuses Import and FillComplete(). More...
	Epetra_CrsMatrix (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Import &RowImporter, const Epetra_Import *DomainImporter, const Epetra_Map *DomainMap, const Epetra_Map *RangeMap, bool RestrictCommunicator)
	Epetra CrsMatrix constructor that also fuses Import and FillComplete(). More...
	Epetra_CrsMatrix (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Export &RowExporter, const Epetra_Map *DomainMap=0, const Epetra_Map *RangeMap=0, bool RestrictCommunicator=false)
	Epetra CrsMatrix constructor that also fuses Ex[prt and FillComplete(). More...
	Epetra_CrsMatrix (const Epetra_CrsMatrix &SourceMatrix, const Epetra_Export &RowExporter, const Epetra_Export *DomainExporter, const Epetra_Map *DomainMap, const Epetra_Map *RangeMap, bool RestrictCommunicator)
	Epetra CrsMatrix constructor that also fuses Ex[prt and FillComplete(). More...
	Epetra_CrsMatrix (const Epetra_CrsMatrix &Matrix)
	Copy constructor.
virtual	~Epetra_CrsMatrix ()
	Epetra_CrsMatrix Destructor.
Insertion/Replace/SumInto methods
Epetra_CrsMatrix &	operator= (const Epetra_CrsMatrix &src)
	Assignment operator.
int	PutScalar (double ScalarConstant)
	Initialize all values in the matrix with constant value. More...
int	Scale (double ScalarConstant)
	Multiply all values in the matrix by a constant value (in place: A <- ScalarConstant * A). More...
virtual int	InsertGlobalValues (int GlobalRow, int NumEntries, const double *Values, const int *Indices)
	Insert a list of elements in a given global row of the matrix. More...
virtual int	InsertGlobalValues (long long GlobalRow, int NumEntries, const double *Values, const long long *Indices)
virtual int	InsertGlobalValues (int GlobalRow, int NumEntries, double *Values, int *Indices)
	Insert a list of elements in a given global row of the matrix. More...
virtual int	InsertGlobalValues (long long GlobalRow, int NumEntries, double *Values, long long *Indices)
virtual int	ReplaceGlobalValues (int GlobalRow, int NumEntries, const double *Values, const int *Indices)
	Replace specified existing values with this list of entries for a given global row of the matrix. More...
virtual int	ReplaceGlobalValues (long long GlobalRow, int NumEntries, const double *Values, const long long *Indices)
virtual int	SumIntoGlobalValues (int GlobalRow, int NumEntries, const double *Values, const int *Indices)
	Add this list of entries to existing values for a given global row of the matrix. More...
virtual int	SumIntoGlobalValues (long long GlobalRow, int NumEntries, const double *Values, const long long *Indices)
int	InsertMyValues (int MyRow, int NumEntries, const double *Values, const int *Indices)
	Insert a list of elements in a given local row of the matrix. More...
int	InsertMyValues (int MyRow, int NumEntries, double *Values, int *Indices)
	Insert a list of elements in a given local row of the matrix. More...
int	ReplaceMyValues (int MyRow, int NumEntries, const double *Values, const int *Indices)
	Replace current values with this list of entries for a given local row of the matrix. More...
int	SumIntoMyValues (int MyRow, int NumEntries, const double *Values, const int *Indices)
	Add this list of entries to existing values for a given local row of the matrix. More...
int	ReplaceDiagonalValues (const Epetra_Vector &Diagonal)
	Replaces diagonal values of the matrix with those in the user-provided vector. More...
Transformation methods
int	FillComplete (bool OptimizeDataStorage=true)
	Signal that data entry is complete. Perform transformations to local index space.
int	FillComplete (const Epetra_Map &DomainMap, const Epetra_Map &RangeMap, bool OptimizeDataStorage=true)
	Signal that data entry is complete. Perform transformations to local index space.
int	OptimizeStorage ()
	Make consecutive row index sections contiguous, minimize internal storage used for constructing graph. More...
int	MakeDataContiguous ()
	Eliminates memory that is used for construction. Make consecutive row index sections contiguous.
Extraction methods
int	ExtractGlobalRowCopy (int GlobalRow, int Length, int &NumEntries, double *Values, int *Indices) const
	Returns a copy of the specified global row in user-provided arrays. More...
int	ExtractGlobalRowCopy (long long GlobalRow, int Length, int &NumEntries, double *Values, long long *Indices) const
int	ExtractMyRowCopy (int MyRow, int Length, int &NumEntries, double *Values, int *Indices) const
	Returns a copy of the specified local row in user-provided arrays. More...
int	ExtractGlobalRowCopy (int GlobalRow, int Length, int &NumEntries, double *Values) const
	Returns a copy of the specified global row values in user-provided array. More...
int	ExtractGlobalRowCopy (long long GlobalRow, int Length, int &NumEntries, double *Values) const
int	ExtractMyRowCopy (int MyRow, int Length, int &NumEntries, double *Values) const
	Returns a copy of the specified local row values in user-provided array. More...
int	ExtractDiagonalCopy (Epetra_Vector &Diagonal) const
	Returns a copy of the main diagonal in a user-provided vector. More...
int	ExtractGlobalRowView (int GlobalRow, int &NumEntries, double *&Values, int *&Indices) const
	Returns a view of the specified global row values via pointers to internal data. More...
int	ExtractGlobalRowView (long long GlobalRow, int &NumEntries, double *&Values, long long *&Indices) const
int	ExtractMyRowView (int MyRow, int &NumEntries, double *&Values, int *&Indices) const
	Returns a view of the specified local row values via pointers to internal data. More...
int	ExtractGlobalRowView (int GlobalRow, int &NumEntries, double *&Values) const
	Returns a view of the specified global row values via pointers to internal data. More...
int	ExtractGlobalRowView (long long GlobalRow, int &NumEntries, double *&Values) const
int	ExtractMyRowView (int MyRow, int &NumEntries, double *&Values) const
	Returns a view of the specified local row values via pointers to internal data. More...
Computational methods
int	Multiply (bool TransA, const Epetra_Vector &x, Epetra_Vector &y) const
	Returns the result of a Epetra_CrsMatrix multiplied by a Epetra_Vector x in y. More...
int	Multiply1 (bool TransA, const Epetra_Vector &x, Epetra_Vector &y) const
int	Multiply (bool TransA, const Epetra_MultiVector &X, Epetra_MultiVector &Y) const
	Returns the result of a Epetra_CrsMatrix multiplied by a Epetra_MultiVector X in Y. More...
int	Multiply1 (bool TransA, const Epetra_MultiVector &X, Epetra_MultiVector &Y) const
int	Solve (bool Upper, bool Trans, bool UnitDiagonal, const Epetra_Vector &x, Epetra_Vector &y) const
	Returns the result of a local solve using the Epetra_CrsMatrix on a Epetra_Vector x in y. More...
int	Solve (bool Upper, bool Trans, bool UnitDiagonal, const Epetra_MultiVector &X, Epetra_MultiVector &Y) const
	Returns the result of a local solve using the Epetra_CrsMatrix a Epetra_MultiVector X in Y. More...
int	InvRowSums (Epetra_Vector &x) const
	Computes the inverse of the sum of absolute values of the rows of the Epetra_CrsMatrix, results returned in x. More...
int	InvRowMaxs (Epetra_Vector &x) const
	Computes the inverse of the max of absolute values of the rows of the Epetra_CrsMatrix, results returned in x. More...
int	LeftScale (const Epetra_Vector &x)
	Scales the Epetra_CrsMatrix on the left with a Epetra_Vector x. More...
int	InvColSums (Epetra_Vector &x) const
	Computes the inverse of the sum of absolute values of the columns of the Epetra_CrsMatrix, results returned in x. More...
int	InvColMaxs (Epetra_Vector &x) const
	Computes the max of absolute values of the columns of the Epetra_CrsMatrix, results returned in x. More...
int	RightScale (const Epetra_Vector &x)
	Scales the Epetra_CrsMatrix on the right with a Epetra_Vector x. More...
Matrix Properties Query Methods
bool	Filled () const
	If FillComplete() has been called, this query returns true, otherwise it returns false.
bool	StorageOptimized () const
	If OptimizeStorage() has been called, this query returns true, otherwise it returns false.
bool	IndicesAreGlobal () const
	If matrix indices has not been transformed to local, this query returns true, otherwise it returns false.
bool	IndicesAreLocal () const
	If matrix indices has been transformed to local, this query returns true, otherwise it returns false.
bool	IndicesAreContiguous () const
	If matrix indices are packed into single array (done in OptimizeStorage()) return true, otherwise false.
bool	LowerTriangular () const
	If matrix is lower triangular in local index space, this query returns true, otherwise it returns false.
bool	UpperTriangular () const
	If matrix is upper triangular in local index space, this query returns true, otherwise it returns false.
bool	NoDiagonal () const
	If matrix has no diagonal entries in global index space, this query returns true, otherwise it returns false.
Attribute access functions
double	NormInf () const
	Returns the infinity norm of the global matrix.
double	NormOne () const
	Returns the one norm of the global matrix.
double	NormFrobenius () const
	Returns the frobenius norm of the global matrix.
int	NumGlobalNonzeros () const
	Returns the number of nonzero entries in the global matrix.
long long	NumGlobalNonzeros64 () const
int	NumGlobalRows () const
	Returns the number of global matrix rows.
long long	NumGlobalRows64 () const
int	NumGlobalCols () const
	Returns the number of global matrix columns.
long long	NumGlobalCols64 () const
int	NumGlobalDiagonals () const
	Returns the number of global nonzero diagonal entries, based on global row/column index comparisons.
long long	NumGlobalDiagonals64 () const
int	NumMyNonzeros () const
	Returns the number of nonzero entries in the calling processor's portion of the matrix.
int	NumMyRows () const
	Returns the number of matrix rows owned by the calling processor.
int	NumMyCols () const
	Returns the number of entries in the set of column-indices that appear on this processor. More...
int	NumMyDiagonals () const
	Returns the number of local nonzero diagonal entries, based on global row/column index comparisons. More...
int	NumGlobalEntries (long long Row) const
	Returns the current number of nonzero entries in specified global row on this processor.
int	NumAllocatedGlobalEntries (int Row) const
	Returns the allocated number of nonzero entries in specified global row on this processor.
int	MaxNumEntries () const
	Returns the maximum number of nonzero entries across all rows on this processor. More...
int	GlobalMaxNumEntries () const
	Returns the maximum number of nonzero entries across all rows on all processors. More...
int	NumMyEntries (int Row) const
	Returns the current number of nonzero entries in specified local row on this processor.
int	NumAllocatedMyEntries (int Row) const
	Returns the allocated number of nonzero entries in specified local row on this processor.
int	IndexBase () const
	Returns the index base for row and column indices for this graph. More...
long long	IndexBase64 () const
bool	StaticGraph ()
	Returns true if the graph associated with this matrix was pre-constructed and therefore not changeable.
const Epetra_CrsGraph &	Graph () const
	Returns a reference to the Epetra_CrsGraph object associated with this matrix.
const Epetra_Map &	RowMap () const
	Returns the Epetra_Map object associated with the rows of this matrix.
int	ReplaceRowMap (const Epetra_BlockMap &newmap)
	Replaces the current RowMap with the user-specified map object. More...
bool	HaveColMap () const
	Returns true if we have a well-defined ColMap, and returns false otherwise. More...
int	ReplaceColMap (const Epetra_BlockMap &newmap)
	Replaces the current ColMap with the user-specified map object. More...
int	ReplaceDomainMapAndImporter (const Epetra_Map &NewDomainMap, const Epetra_Import *NewImporter)
	Replaces the current DomainMap & Importer with the user-specified map object. More...
int	RemoveEmptyProcessesInPlace (const Epetra_BlockMap *NewMap)
	Remove processes owning zero rows from the Maps and their communicator. More...
const Epetra_Map &	ColMap () const
	Returns the Epetra_Map object that describes the set of column-indices that appear in each processor's locally owned matrix rows. More...
const Epetra_Map &	DomainMap () const
	Returns the Epetra_Map object associated with the domain of this matrix operator. More...
const Epetra_Map &	RangeMap () const
	Returns the Epetra_Map object associated with the range of this matrix operator. More...
const Epetra_Import *	Importer () const
	Returns the Epetra_Import object that contains the import operations for distributed operations.
const Epetra_Export *	Exporter () const
	Returns the Epetra_Export object that contains the export operations for distributed operations.
const Epetra_Comm &	Comm () const
	Returns a pointer to the Epetra_Comm communicator associated with this matrix.
Local/Global ID methods
int	LRID (int GRID_in) const
	Returns the local row index for given global row index, returns -1 if no local row for this global row.
int	LRID (long long GRID_in) const
int	GRID (int LRID_in) const
	Returns the global row index for give local row index, returns IndexBase-1 if we don't have this local row.
long long	GRID64 (int LRID_in) const
int	LCID (int GCID_in) const
	Returns the local column index for given global column index, returns -1 if no local column for this global column. More...
int	LCID (long long GCID_in) const
int	GCID (int LCID_in) const
	Returns the global column index for give local column index, returns IndexBase-1 if we don't have this local column. More...
long long	GCID64 (int LCID_in) const
bool	MyGRID (int GRID_in) const
	Returns true if the GRID passed in belongs to the calling processor in this map, otherwise returns false.
bool	MyGRID (long long GRID_in) const
bool	MyLRID (int LRID_in) const
	Returns true if the LRID passed in belongs to the calling processor in this map, otherwise returns false.
bool	MyGCID (int GCID_in) const
	Returns true if the GCID passed in belongs to the calling processor in this map, otherwise returns false. More...
bool	MyGCID (long long GCID_in) const
bool	MyLCID (int LCID_in) const
	Returns true if the LRID passed in belongs to the calling processor in this map, otherwise returns false. More...
bool	MyGlobalRow (int GID) const
	Returns true of GID is owned by the calling processor, otherwise it returns false.
bool	MyGlobalRow (long long GID) const
I/O Methods
virtual void	Print (std::ostream &os) const
	Print method.
Additional methods required to support the Epetra_Operator interface
const char *	Label () const
	Returns a character string describing the operator.
int	SetUseTranspose (bool UseTranspose_in)
	If set true, transpose of this operator will be applied. More...
int	Apply (const Epetra_MultiVector &X, Epetra_MultiVector &Y) const
	Returns the result of a Epetra_Operator applied to a Epetra_MultiVector X in Y. More...
int	ApplyInverse (const Epetra_MultiVector &X, Epetra_MultiVector &Y) const
	Returns the result of a Epetra_Operator inverse applied to an Epetra_MultiVector X in Y. More...
bool	HasNormInf () const
	Returns true because this class can compute an Inf-norm.
bool	UseTranspose () const
	Returns the current UseTranspose setting.
const Epetra_Map &	OperatorDomainMap () const
	Returns the Epetra_Map object associated with the domain of this matrix operator.
const Epetra_Map &	OperatorRangeMap () const
	Returns the Epetra_Map object associated with the range of this matrix operator.
Additional methods required to implement Epetra_RowMatrix interface
int	NumMyRowEntries (int MyRow, int &NumEntries) const
	Return the current number of values stored for the specified local row. More...
const Epetra_BlockMap &	Map () const
	Map() method inherited from Epetra_DistObject.
const Epetra_Map &	RowMatrixRowMap () const
	Returns the Epetra_Map object associated with the rows of this matrix.
const Epetra_Map &	RowMatrixColMap () const
	Returns the Epetra_Map object associated with columns of this matrix.
const Epetra_Import *	RowMatrixImporter () const
	Returns the Epetra_Import object that contains the import operations for distributed operations.
Inlined Operator Methods
double *	operator[] (int Loc)
	Inlined bracket operator for fast access to data. (Const and Non-const versions) More...
double *	operator[] (int Loc) const
Expert-only methods: These methods are intended for experts only and have some risk of changing in the future, since they rely on underlying data structure assumptions
int	ExtractCrsDataPointers (int *&IndexOffset, int *&Indices, double *&Values_in) const
	Returns internal data pointers associated with Crs matrix format. More...
Epetra_IntSerialDenseVector &	ExpertExtractIndexOffset ()
	Returns a reference to the Epetra_IntSerialDenseVector used to hold the local IndexOffsets (CRS rowptr) More...
Epetra_IntSerialDenseVector &	ExpertExtractIndices ()
	Returns a reference to the Epetra_IntSerialDenseVector used to hold the local All_Indices (CRS colind) More...
double *&	ExpertExtractValues ()
	Returns a reference to the double* used to hold the values array. More...
int	ExpertStaticFillComplete (const Epetra_Map &DomainMap, const Epetra_Map &RangeMap, const Epetra_Import *Importer=0, const Epetra_Export *Exporter=0, int NumMyDiagonals=-1)
	Performs a FillComplete on an object that aready has filled CRS data. More...
int	ExpertMakeUniqueCrsGraphData ()
	Makes sure this matrix has a unique CrsGraphData object. More...
int	SortGhostsAssociatedWithEachProcessor (bool Flag)
	Forces FillComplete() to locally order ghostnodes associated with each remote processor in ascending order. More...
Deprecated methods: These methods still work, but will be removed in a future version
const Epetra_Map &	ImportMap () const
	Use ColMap() instead.
int	TransformToLocal ()
	Use FillComplete() instead.
int	TransformToLocal (const Epetra_Map *DomainMap, const Epetra_Map *RangeMap)
	Use FillComplete(const Epetra_Map& DomainMap, const Epetra_Map& RangeMap) instead.
Public Member Functions inherited from Epetra_DistObject
	Epetra_DistObject (const Epetra_BlockMap &Map)
	Basic Epetra_DistObject constuctor. More...
	Epetra_DistObject (const Epetra_BlockMap &Map, const char *const Label)
	Epetra_DistObject (const Epetra_DistObject &Source)
	Epetra_DistObject copy constructor.
virtual	~Epetra_DistObject ()
	Epetra_DistObject destructor.
int	Import (const Epetra_SrcDistObject &A, const Epetra_Import &Importer, Epetra_CombineMode CombineMode, const Epetra_OffsetIndex *Indexor=0)
	Imports an Epetra_DistObject using the Epetra_Import object. More...
int	Import (const Epetra_SrcDistObject &A, const Epetra_Export &Exporter, Epetra_CombineMode CombineMode, const Epetra_OffsetIndex *Indexor=0)
	Imports an Epetra_DistObject using the Epetra_Export object. More...
int	Export (const Epetra_SrcDistObject &A, const Epetra_Import &Importer, Epetra_CombineMode CombineMode, const Epetra_OffsetIndex *Indexor=0)
	Exports an Epetra_DistObject using the Epetra_Import object. More...
int	Export (const Epetra_SrcDistObject &A, const Epetra_Export &Exporter, Epetra_CombineMode CombineMode, const Epetra_OffsetIndex *Indexor=0)
	Exports an Epetra_DistObject using the Epetra_Export object. More...
const Epetra_BlockMap &	Map () const
	Returns the address of the Epetra_BlockMap for this multi-vector.
const Epetra_Comm &	Comm () const
	Returns the address of the Epetra_Comm for this multi-vector.
bool	DistributedGlobal () const
	Returns true if this multi-vector is distributed global, i.e., not local replicated.
Public Member Functions inherited from Epetra_Object
	Epetra_Object (int TracebackModeIn=-1, bool set_label=true)
	Epetra_Object Constructor. More...
	Epetra_Object (const char *const Label, int TracebackModeIn=-1)
	Epetra_Object Constructor. More...
	Epetra_Object (const Epetra_Object &Object)
	Epetra_Object Copy Constructor. More...
virtual	~Epetra_Object ()
	Epetra_Object Destructor. More...
virtual int	ReportError (const std::string Message, int ErrorCode) const
	Error reporting method.
virtual void	SetLabel (const char *const Label)
	Epetra_Object Label definition using char *. More...
Public Member Functions inherited from Epetra_SrcDistObject
virtual	~Epetra_SrcDistObject ()
	Epetra_SrcDistObject destructor.
Public Member Functions inherited from Epetra_CompObject
Epetra_CompObject &	operator= (const Epetra_CompObject &src)
	Epetra_CompObject ()
	Basic Epetra_CompObject constuctor.
	Epetra_CompObject (const Epetra_CompObject &Source)
	Epetra_CompObject copy constructor.
virtual	~Epetra_CompObject ()
	Epetra_CompObject destructor.
void	SetFlopCounter (const Epetra_Flops &FlopCounter_in)
	Set the internal Epetra_Flops() pointer.
void	SetFlopCounter (const Epetra_CompObject &CompObject)
	Set the internal Epetra_Flops() pointer to the flop counter of another Epetra_CompObject.
void	UnsetFlopCounter ()
	Set the internal Epetra_Flops() pointer to 0 (no flops counted).
Epetra_Flops *	GetFlopCounter () const
	Get the pointer to the Epetra_Flops() object associated with this object, returns 0 if none.
void	ResetFlops () const
	Resets the number of floating point operations to zero for this multi-vector.
double	Flops () const
	Returns the number of floating point operations with this multi-vector.
void	UpdateFlops (int Flops_in) const
	Increment Flop count for this object.
void	UpdateFlops (long int Flops_in) const
	Increment Flop count for this object.
void	UpdateFlops (long long Flops_in) const
	Increment Flop count for this object.
void	UpdateFlops (double Flops_in) const
	Increment Flop count for this object.
void	UpdateFlops (float Flops_in) const
	Increment Flop count for this object.
Public Member Functions inherited from Epetra_BLAS
	Epetra_BLAS (void)
	Epetra_BLAS Constructor. More...
	Epetra_BLAS (const Epetra_BLAS &BLAS)
	Epetra_BLAS Copy Constructor. More...
virtual	~Epetra_BLAS (void)
	Epetra_BLAS Destructor.
float	ASUM (const int N, const float *X, const int INCX=1) const
	Epetra_BLAS one norm function (SASUM).
double	ASUM (const int N, const double *X, const int INCX=1) const
	Epetra_BLAS one norm function (DASUM).
float	DOT (const int N, const float *X, const float *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS dot product function (SDOT).
double	DOT (const int N, const double *X, const double *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS dot product function (DDOT).
float	NRM2 (const int N, const float *X, const int INCX=1) const
	Epetra_BLAS norm function (SNRM2).
double	NRM2 (const int N, const double *X, const int INCX=1) const
	Epetra_BLAS norm function (DNRM2).
void	SCAL (const int N, const float ALPHA, float *X, const int INCX=1) const
	Epetra_BLAS vector scale function (SSCAL)
void	SCAL (const int N, const double ALPHA, double *X, const int INCX=1) const
	Epetra_BLAS vector scale function (DSCAL)
void	COPY (const int N, const float *X, float *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS vector copy function (SCOPY)
void	COPY (const int N, const double *X, double *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS vector scale function (DCOPY)
int	IAMAX (const int N, const float *X, const int INCX=1) const
	Epetra_BLAS arg maximum of absolute value function (ISAMAX)
int	IAMAX (const int N, const double *X, const int INCX=1) const
	Epetra_BLAS arg maximum of absolute value function (IDAMAX)
void	AXPY (const int N, const float ALPHA, const float *X, float *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS vector update function (SAXPY)
void	AXPY (const int N, const double ALPHA, const double *X, double *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS vector update function (DAXPY)
void	GEMV (const char TRANS, const int M, const int N, const float ALPHA, const float *A, const int LDA, const float *X, const float BETA, float *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS matrix-vector multiply function (SGEMV)
void	GEMV (const char TRANS, const int M, const int N, const double ALPHA, const double *A, const int LDA, const double *X, const double BETA, double *Y, const int INCX=1, const int INCY=1) const
	Epetra_BLAS matrix-vector multiply function (DGEMV)
void	GEMM (const char TRANSA, const char TRANSB, const int M, const int N, const int K, const float ALPHA, const float *A, const int LDA, const float *B, const int LDB, const float BETA, float *C, const int LDC) const
	Epetra_BLAS matrix-matrix multiply function (SGEMM)
void	GEMM (const char TRANSA, const char TRANSB, const int M, const int N, const int K, const double ALPHA, const double *A, const int LDA, const double *B, const int LDB, const double BETA, double *C, const int LDC) const
	Epetra_BLAS matrix-matrix multiply function (DGEMM)
void	SYMM (const char SIDE, const char UPLO, const int M, const int N, const float ALPHA, const float *A, const int LDA, const float *B, const int LDB, const float BETA, float *C, const int LDC) const
	Epetra_BLAS symmetric matrix-matrix multiply function (SSYMM)
void	SYMM (const char SIDE, const char UPLO, const int M, const int N, const double ALPHA, const double *A, const int LDA, const double *B, const int LDB, const double BETA, double *C, const int LDC) const
	Epetra_BLAS matrix-matrix multiply function (DSYMM)
void	TRMM (const char SIDE, const char UPLO, const char TRANSA, const char DIAG, const int M, const int N, const float ALPHA, const float *A, const int LDA, float *B, const int LDB) const
	Epetra_BLAS triangular matrix-matrix multiply function (STRMM)
void	TRMM (const char SIDE, const char UPLO, const char TRANSA, const char DIAG, const int M, const int N, const double ALPHA, const double *A, const int LDA, double *B, const int LDB) const
	Epetra_BLAS triangular matrix-matrix multiply function (DTRMM)
void	SYRK (const char UPLO, const char TRANS, const int N, const int K, const float ALPHA, const float *A, const int LDA, const float BETA, float *C, const int LDC) const
	Eperta_BLAS symetric rank k funtion (ssyrk)
void	SYRK (const char UPLO, const char TRANS, const int N, const int K, const double ALPHA, const double *A, const int LDA, const double BETA, double *C, const int LDC) const
	Eperta_BLAS symetric rank k funtion (dsyrk)
Public Member Functions inherited from Epetra_RowMatrix
virtual	~Epetra_RowMatrix ()
	Destructor.
Public Member Functions inherited from Epetra_Operator
virtual	~Epetra_Operator ()
	Destructor.

Protected Member Functions
bool	Allocated () const
int	SetAllocated (bool Flag)
double **	Values () const
double *	All_Values () const
double *	Values (int LocalRow) const
void	InitializeDefaults ()
int	Allocate ()
int	InsertValues (int LocalRow, int NumEntries, double *Values, int *Indices)
int	InsertValues (int LocalRow, int NumEntries, const double *Values, const int *Indices)
int	InsertValues (int LocalRow, int NumEntries, double *Values, long long *Indices)
int	InsertValues (int LocalRow, int NumEntries, const double *Values, const long long *Indices)
int	InsertOffsetValues (long long GlobalRow, int NumEntries, double *Values, int *Indices)
int	InsertOffsetValues (long long GlobalRow, int NumEntries, const double *Values, const int *Indices)
int	ReplaceOffsetValues (long long GlobalRow, int NumEntries, const double *Values, const int *Indices)
int	SumIntoOffsetValues (long long GlobalRow, int NumEntries, const double *Values, const int *Indices)
void	UpdateImportVector (int NumVectors) const
void	UpdateExportVector (int NumVectors) const
void	GeneralMV (double *x, double *y) const
void	GeneralMTV (double *x, double *y) const
void	GeneralMM (double **X, int LDX, double **Y, int LDY, int NumVectors) const
void	GeneralMTM (double **X, int LDX, double **Y, int LDY, int NumVectors) const
void	GeneralSV (bool Upper, bool Trans, bool UnitDiagonal, double *x, double *y) const
void	GeneralSM (bool Upper, bool Trans, bool UnitDiagonal, double **X, int LDX, double **Y, int LDY, int NumVectors) const
void	SetStaticGraph (bool Flag)
int	CheckSizes (const Epetra_SrcDistObject &A)
	Allows the source and target (this) objects to be compared for compatibility, return nonzero if not.
int	CopyAndPermute (const Epetra_SrcDistObject &Source, int NumSameIDs, int NumPermuteIDs, int *PermuteToLIDs, int *PermuteFromLIDs, const Epetra_OffsetIndex *Indexor, Epetra_CombineMode CombineMode=Zero)
	Perform ID copies and permutations that are on processor.
int	CopyAndPermuteCrsMatrix (const Epetra_CrsMatrix &A, int NumSameIDs, int NumPermuteIDs, int *PermuteToLIDs, int *PermuteFromLIDs, const Epetra_OffsetIndex *Indexor, Epetra_CombineMode CombineMode)
int	CopyAndPermuteRowMatrix (const Epetra_RowMatrix &A, int NumSameIDs, int NumPermuteIDs, int *PermuteToLIDs, int *PermuteFromLIDs, const Epetra_OffsetIndex *Indexor, Epetra_CombineMode CombineMode)
int	PackAndPrepare (const Epetra_SrcDistObject &Source, int NumExportIDs, int *ExportLIDs, int &LenExports, char *&Exports, int &SizeOfPacket, int *Sizes, bool &VarSizes, Epetra_Distributor &Distor)
	Perform any packing or preparation required for call to DoTransfer().
int	UnpackAndCombine (const Epetra_SrcDistObject &Source, int NumImportIDs, int *ImportLIDs, int LenImports, char *Imports, int &SizeOfPacket, Epetra_Distributor &Distor, Epetra_CombineMode CombineMode, const Epetra_OffsetIndex *Indexor)
	Perform any unpacking and combining after call to DoTransfer().
int	SortEntries ()
	Sort column entries, row-by-row, in ascending order.
bool	Sorted () const
	If SortEntries() has been called, this query returns true, otherwise it returns false.
int	MergeRedundantEntries ()
	Add entries that have the same column index. Remove redundant entries from list.
bool	NoRedundancies () const
	If MergeRedundantEntries() has been called, this query returns true, otherwise it returns false.
void	DeleteMemory ()
Protected Member Functions inherited from Epetra_DistObject
virtual int	DoTransfer (const Epetra_SrcDistObject &A, Epetra_CombineMode CombineMode, int NumSameIDs, int NumPermuteIDs, int NumRemoteIDs, int NumExportIDs, int *PermuteToLIDs, int *PermuteFromLIDs, int *RemoteLIDs, int *ExportLIDs, int &LenExports, char *&Exports, int &LenImports, char *&Imports, Epetra_Distributor &Distor, bool DoReverse, const Epetra_OffsetIndex *Indexor)
	Perform actual transfer (redistribution) of data across memory images, using Epetra_Distributor object.
Protected Member Functions inherited from Epetra_Object
std::string	toString (const int &x) const
std::string	toString (const long long &x) const
std::string	toString (const double &x) const

Protected Attributes
Epetra_CrsGraph	Graph_
bool	Allocated_
bool	StaticGraph_
bool	UseTranspose_
bool	constructedWithFilledGraph_
bool	matrixFillCompleteCalled_
bool	StorageOptimized_
double **	Values_
int *	Values_alloc_lengths_
double *	All_Values_
double	NormInf_
double	NormOne_
double	NormFrob_
int	NumMyRows_
Epetra_MultiVector *	ImportVector_
Epetra_MultiVector *	ExportVector_
Epetra_DataAccess	CV_
bool	squareFillCompleteCalled_
Protected Attributes inherited from Epetra_DistObject
Epetra_BlockMap	Map_
const Epetra_Comm *	Comm_
char *	Exports_
char *	Imports_
int	LenExports_
int	LenImports_
int *	Sizes_
Protected Attributes inherited from Epetra_CompObject
Epetra_Flops *	FlopCounter_

Additional Inherited Members
Static Public Member Functions inherited from Epetra_Object
static void	SetTracebackMode (int TracebackModeValue)
	Set the value of the Epetra_Object error traceback report mode. More...
static int	GetTracebackMode ()
	Get the value of the Epetra_Object error report mode.
static std::ostream &	GetTracebackStream ()
	Get the output stream for error reporting.
Static Public Attributes inherited from Epetra_Object
static int	TracebackMode

Detailed Description

Epetra_CrsMatrix: A class for constructing and using real-valued double-precision sparse compressed row matrices.

The Epetra_CrsMatrix class is a sparse compressed row matrix object. This matrix can be

used in a parallel setting, with data distribution described by Epetra_Map attributes. The structure or graph of the matrix is defined by an Epetra_CrsGraph attribute.

In addition to coefficient access, the primary operations provided by Epetra_CrsMatrix are matrix times vector and matrix times multi-vector multiplication.

Epetra_CrsMatrix matrices can be square or rectangular.

Creating and filling Epetra_CrsMatrix objects

Constructing Epetra_CrsMatrix objects is a multi-step process. The basic steps are as follows:

1. Create Epetra_CrsMatrix instance, including storage, via one of the constructors:
   • Constructor that accepts one Epetra_Map object, a row-map defining the distribution of matrix rows.
   • Constructor that accepts two Epetra_Map objects. (The second map is a column-map, and describes the set of column-indices that appear in each processor's portion of the matrix. Generally these are overlapping sets – column-indices may appear on more than one processor.)
   • Constructor that accepts an Epetra_CrsGraph object, defining the non-zero structure of the matrix.
   Note that the constructors which accept Epetra_Map arguments also accept an argument that gives an estimate of the number of nonzeros per row. This allows storage to be pre-allocated and can improve the performance of the data input methods. The estimate need not be accurate, as additional storage is allocated automatically when needed. However, a more accurate estimate helps performance by reducing the amount of extra memory allocation.
2. Enter values via one or more Insert/Replace/SumInto functions.
3. Complete construction by calling FillComplete.

Note that, even after a matrix is constructed (FillComplete has been called), it is possible to update existing matrix entries. It is not possible to create new entries.

Epetra_Map attributes

Epetra_CrsMatrix objects have four Epetra_Map attributes, which are held by the Epetra_CrsGraph attribute.

The Epetra_Map attributes can be obtained via these accessor methods:

• RowMap() Describes the numbering and distribution of the rows of the matrix. The row-map exists and is valid for the entire life of the matrix. The set of matrix rows is defined by the row-map and may not be changed. Rows may not be inserted or deleted by the user. The only change that may be made is that the user can replace the row-map with a compatible row-map (which is the same except for re-numbering) by calling the ReplaceRowMap() method.
• ColMap() Describes the set of column-indices that appear in the rows in each processor's portion of the matrix. Unless provided by the user at construction time, a valid column-map doesn't exist until FillComplete() is called.
• RangeMap() Describes the range of the matrix operator. e.g., for a matrix-vector product operation, the result vector's map must be compatible with the range-map of this matrix. The range-map is usually the same as the row-map. The range-map is set equal to the row-map at matrix creation time, but may be specified by the user when FillComplete() is called.
• DomainMap() Describes the domain of the matrix operator. The domain-map can be specified by the user when FillComplete() is called. Until then, it is set equal to the row-map.

It is important to note that while the row-map and the range-map are often the same, the column-map and the domain-map are almost never the same. The set of entries in a distributed column-map almost always form overlapping sets, with entries being associated with more than one processor. A domain-map, on the other hand, must be a 1-to-1 map, with entries being associated with only a single processor.

Local versus Global Indices

Epetra_CrsMatrix has query functions IndicesAreLocal() and IndicesAreGlobal(), which are used to determine whether the underlying Epetra_CrsGraph attribute's column-indices have been transformed into a local index space or not. (This transformation occurs when the method Epetra_CrsGraph::FillComplete() is called, which happens when the method Epetra_CrsMatrix::FillComplete() is called.) The state of the indices in the graph determines the behavior of many Epetra_CrsMatrix methods. If an Epetra_CrsMatrix instance is constructed using one of the constructors that does not accept a pre-existing Epetra_CrsGraph object, then an Epetra_CrsGraph attribute is created internally and its indices remain untransformed (IndicesAreGlobal()==true) until Epetra_CrsMatrix::FillComplete() is called. The query function Epetra_CrsMatrix::Filled() returns true if Epetra_CrsMatrix::FillComplete() has been called.

Note the following method characteristics:

• InsertGlobalValues() may only be used to insert new nonzeros in the matrix if indices are global.
• SumIntoGlobalValues() may be used regardless of whether indices are global or local, but can only be used to update matrix locations that already exist; it can never be used to establish new nonzero locations.
• ReplaceGlobalValues() may also be used only to update matrix locations that already exist, and works regardless of whether indices are local or global.
• SumIntoMyValues() and ReplaceMyValues() may only be used if indices are local.
• Multiply() may only be used after FillComplete() has been called.

Most methods have preconditions documented, check documentation for specific methods not mentioned here.

Counting Floating Point Operations

Each Epetra_CrsMatrix object keeps track of the number of serial floating point operations performed using the specified object as the this argument to the function. The Flops() function returns this number as a double precision number. Using this information, in conjunction with the Epetra_Time class, one can get accurate parallel performance numbers. The ResetFlops() function resets the floating point counter.

Warning

A Epetra_Map is required for the Epetra_CrsMatrix constructor.

Constructor & Destructor Documentation

Epetra_CrsMatrix::Epetra_CrsMatrix	(	Epetra_DataAccess	CV,
		const Epetra_Map &	RowMap,
		const int *	NumEntriesPerRow,
		bool	StaticProfile = false
	)

Epetra_CrsMatrix constructor with variable number of indices per row.

Creates a Epetra_CrsMatrix object and allocates storage.

Parameters

CV	- (In) An Epetra_DataAccess enumerated type set to Copy or View.
RowMap	- (In) An Epetra_Map defining the numbering and distribution of matrix rows.
NumEntriesPerRow	- (In) An integer array of length NumRows such that NumEntriesPerRow[i] indicates the (approximate if StaticProfile=false) number of entries in the ith row.
StaticProfile	- (In) Optional argument that indicates whether or not NumIndicesPerRow should be interpreted as an exact count of nonzeros, or should be used as an approximation. By default this value is false, allowing the profile to be determined dynamically. If the user sets it to true, then the memory allocation for the Epetra_CrsGraph object will be done in one large block, saving on memory fragmentation and generally improving the performance of matrix multiplication and solve kernels.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	Epetra_DataAccess	CV,
		const Epetra_Map &	RowMap,
		int	NumEntriesPerRow,
		bool	StaticProfile = false
	)

Epetra_CrsMatrix constructor with fixed number of indices per row.

Creates a Epetra_CrsMatrix object and allocates storage.

Parameters

CV	- (In) An Epetra_DataAccess enumerated type set to Copy or View.
RowMap	- (In) An Epetra_Map defining the numbering and distribution of matrix rows.
NumEntriesPerRow	- (In) An integer that indicates the (approximate) number of entries in the each row. Note that it is possible to use 0 for this value and let fill occur during the insertion phase.
StaticProfile	- (In) Optional argument that indicates whether or not NumIndicesPerRow should be interpreted as an exact count of nonzeros, or should be used as an approximation. By default this value is false, allowing the profile to be determined dynamically. If the user sets it to true, then the memory allocation for the Epetra_CrsGraph object will be done in one large block, saving on memory fragmentation and generally improving the performance of matrix multiplication and solve kernels.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	Epetra_DataAccess	CV,
		const Epetra_Map &	RowMap,
		const Epetra_Map &	ColMap,
		const int *	NumEntriesPerRow,
		bool	StaticProfile = false
	)

Epetra_CrsMatrix constructor with variable number of indices per row.

Creates a Epetra_CrsMatrix object and allocates storage.

Parameters

CV	- (In) An Epetra_DataAccess enumerated type set to Copy or View.
RowMap	- (In) An Epetra_Map defining the numbering and distribution of matrix rows.
ColMap	- (In) An Epetra_Map defining the set of column-indices that appear in each processor's locally owned matrix rows.
NumEntriesPerRow	- (In) An integer array of length NumRows such that NumEntriesPerRow[i] indicates the (approximate if StaticProfile=false) number of entries in the ith row.
StaticProfile	- (In) Optional argument that indicates whether or not NumIndicesPerRow should be interpreted as an exact count of nonzeros, or should be used as an approximation. By default this value is false, allowing the profile to be determined dynamically. If the user sets it to true, then the memory allocation for the Epetra_CrsGraph object will be done in one large block, saving on memory fragmentation and generally improving the performance of matrix multiplication and solve kernels.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	Epetra_DataAccess	CV,
		const Epetra_Map &	RowMap,
		const Epetra_Map &	ColMap,
		int	NumEntriesPerRow,
		bool	StaticProfile = false
	)

Epetra_CrsMatrix constuctor with fixed number of indices per row.

Creates a Epetra_CrsMatrix object and allocates storage.

Parameters

CV	- (In) An Epetra_DataAccess enumerated type set to Copy or View.
RowMap	- (In) An Epetra_Map defining the numbering and distribution of matrix rows.
ColMap	- (In) An Epetra_Map defining the set of column-indices that appear in each processor's locally owned matrix rows.
NumEntriesPerRow	- (In) An integer that indicates the (approximate if StaticProfile=false) number of entries in the each row. Note that it is possible to use 0 for this value and let fill occur during the insertion phase.
StaticProfile	- (In) Optional argument that indicates whether or not NumIndicesPerRow should be interpreted as an exact count of nonzeros, or should be used as an approximation. By default this value is false, allowing the profile to be determined dynamically. If the user sets it to true, then the memory allocation for the Epetra_CrsGraph object will be done in one large block, saving on memory fragmentation and generally improving the performance of matrix multiplication and solve kernels.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	Epetra_DataAccess	CV,
		const Epetra_CrsGraph &	Graph
	)

Construct a matrix using an existing Epetra_CrsGraph object.

Allows the nonzero structure from another matrix, or a structure that was constructed independently, to be used for this matrix.

Parameters

CV	- (In) An Epetra_DataAccess enumerated type set to Copy or View.
Graph	- (In) A Epetra_CrsGraph object, constructed directly or extracted from another Epetra matrix object.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	const Epetra_CrsMatrix &	SourceMatrix,
		const Epetra_Import &	RowImporter,
		const Epetra_Map *	DomainMap = 0,
		const Epetra_Map *	RangeMap = 0,
		bool	RestrictCommunicator = false
	)

Epetra CrsMatrix constructor that also fuses Import and FillComplete().

A common use case is to create an empty destination Epetra_CrsMatrix, redistribute from a source CrsMatrix (by an Import or Export operation), then call FillComplete() on the destination CrsMatrix. This constructor fuses these three cases, for an Import redistribution.

Fusing redistribution and FillComplete() exposes potential optimizations. For example, it may make constructing the column map faster, and it may avoid intermediate unoptimized storage in the destination Epetra_CrsMatrix. These optimizations may improve performance for specialized kernels like sparse matrix-matrix multiply, as well as for redistributing data after doing load balancing.

The resulting matrix is fill complete (in the sense of Filled()) and has optimized storage (in the sense of StorageOptimized()). It the DomainMap is taken from the SourceMatrix, the RangeMap is presumed to be RowImporter.TargetMap() if not specified

Parameters

SourceMatrix	[in] The source matrix from which to import. The source of an Import must have a nonoverlapping distribution.
RowImporter	[in] The Import instance containing a precomputed redistribution plan. The source Map of the Import must be the same as the row Map of sourceMatrix.
DomainMap	[in] The new domainMap for the new matrix. If not specified, then the DomainMap of the SourceMatrix is used.
RangeMap	[in] The new rangeMap for the new matrix. If not specified, then RowImporter.TargetMap() is used.
RestrictCommunicator	[in] Restricts the resulting communicator to active processes only.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	const Epetra_CrsMatrix &	SourceMatrix,
		const Epetra_Import &	RowImporter,
		const Epetra_Import *	DomainImporter,
		const Epetra_Map *	DomainMap,
		const Epetra_Map *	RangeMap,
		bool	RestrictCommunicator
	)

Epetra CrsMatrix constructor that also fuses Import and FillComplete().

A common use case is to create an empty destination Epetra_CrsMatrix, redistribute from a source CrsMatrix (by an Import or Export operation), then call FillComplete() on the destination CrsMatrix. This constructor fuses these three cases, for an Import redistribution.

Fusing redistribution and FillComplete() exposes potential optimizations. For example, it may make constructing the column map faster, and it may avoid intermediate unoptimized storage in the destination Epetra_CrsMatrix. These optimizations may improve performance for specialized kernels like sparse matrix-matrix multiply, as well as for redistributing data after doing load balancing.

The resulting matrix is fill complete (in the sense of Filled()) and has optimized storage (in the sense of StorageOptimized()). It the DomainMap is taken from the SourceMatrix, the RangeMap is presumed to be RowImporter.TargetMap() if not specified

Parameters

SourceMatrix	[in] The source matrix from which to import. The source of an Import must have a nonoverlapping distribution.
RowImporter	[in] The Import instance containing a precomputed redistribution plan. The source Map of the Import must be the same as the row Map of sourceMatrix.
DomainImporter	[in] The Import instance containing a precomputed redistribution plan (for the domain maps). The source Map of the Import must be the same as the domain Map of sourceMatrix.
DomainMap	[in] The new domainMap for the new matrix.
RangeMap	[in] The new rangeMap for the new matrix.
RestrictCommunicator	[in] Restricts the resulting communicator to active processes only.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	const Epetra_CrsMatrix &	SourceMatrix,
		const Epetra_Export &	RowExporter,
		const Epetra_Map *	DomainMap = 0,
		const Epetra_Map *	RangeMap = 0,
		bool	RestrictCommunicator = false
	)

Epetra CrsMatrix constructor that also fuses Ex[prt and FillComplete().

A common use case is to create an empty destination Epetra_CrsMatrix, redistribute from a source CrsMatrix (by an Import or Export operation), then call FillComplete() on the destination CrsMatrix. This constructor fuses these three cases, for an Import redistribution.

Fusing redistribution and FillComplete() exposes potential optimizations. For example, it may make constructing the column map faster, and it may avoid intermediate unoptimized storage in the destination Epetra_CrsMatrix. These optimizations may improve performance for specialized kernels like sparse matrix-matrix multiply, as well as for redistributing data after doing load balancing.

The resulting matrix is fill complete (in the sense of Filled()) and has optimized storage (in the sense of StorageOptimized()). It the DomainMap is taken from the SourceMatrix, the RangeMap is presumed to be RowImporter.TargetMap() if not specified

Parameters

SourceMatrix	[in] The source matrix from which to import. The source of an Import must have a nonoverlapping distribution.
RowExporter	[in] The Export instance containing a precomputed redistribution plan. The source Map of the Import must be the same as the row Map of sourceMatrix.
DomainMap	[in] The new domainMap for the new matrix. If not specified, then the DomainMap of the SourceMatrix is used.
RangeMap	[in] The new rangeMap for the new matrix. If not specified, then RowExporter.TargetMap() is used.
RestrictCommunicator	[in] Restricts the resulting communicator to active processes only.

Epetra_CrsMatrix::Epetra_CrsMatrix	(	const Epetra_CrsMatrix &	SourceMatrix,
		const Epetra_Export &	RowExporter,
		const Epetra_Export *	DomainExporter,
		const Epetra_Map *	DomainMap,
		const Epetra_Map *	RangeMap,
		bool	RestrictCommunicator
	)

Epetra CrsMatrix constructor that also fuses Ex[prt and FillComplete().

A common use case is to create an empty destination Epetra_CrsMatrix, redistribute from a source CrsMatrix (by an Import or Export operation), then call FillComplete() on the destination CrsMatrix. This constructor fuses these three cases, for an Import redistribution.

Fusing redistribution and FillComplete() exposes potential optimizations. For example, it may make constructing the column map faster, and it may avoid intermediate unoptimized storage in the destination Epetra_CrsMatrix. These optimizations may improve performance for specialized kernels like sparse matrix-matrix multiply, as well as for redistributing data after doing load balancing.

The resulting matrix is fill complete (in the sense of Filled()) and has optimized storage (in the sense of StorageOptimized()). It the DomainMap is taken from the SourceMatrix, the RangeMap is presumed to be RowImporter.TargetMap() if not specified

Parameters

SourceMatrix	[in] The source matrix from which to import. The source of an Import must have a nonoverlapping distribution.
RowExporter	[in] The Export instance containing a precomputed redistribution plan. The source Map of the Import must be the same as the row Map of sourceMatrix.
DomainExporter	[in] The Export instance containing a precomputed redistribution plan (for the domain map. The source Map of the Import must be the same as the domain Map of sourceMatrix.
DomainMap	[in] The new domainMap for the new matrix.
RangeMap	[in] The new rangeMap for the new matrix.
RestrictCommunicator	[in] Restricts the resulting communicator to active processes only.

Member Function Documentation

int Epetra_CrsMatrix::Apply ( const Epetra_MultiVector &  X, Epetra_MultiVector &  Y  ) const

inlinevirtual

Returns the result of a Epetra_Operator applied to a Epetra_MultiVector X in Y.

Parameters

X	- (In) An Epetra_MultiVector of dimension NumVectors to multiply with matrix.
Y	-(Out) An Epetra_MultiVector of dimension NumVectors containing result.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_Operator.

References Multiply(), and UseTranspose().

int Epetra_CrsMatrix::ApplyInverse ( const Epetra_MultiVector &  X, Epetra_MultiVector &  Y  ) const

inlinevirtual

Returns the result of a Epetra_Operator inverse applied to an Epetra_MultiVector X in Y.

In this implementation, we use several existing attributes to determine how virtual method ApplyInverse() should call the concrete method Solve(). We pass in the UpperTriangular(), the Epetra_CrsMatrix::UseTranspose(), and NoDiagonal() methods. The most notable warning is that if a matrix has no diagonal values we assume that there is an implicit unit diagonal that should be accounted for when doing a triangular solve.

Parameters

X	- (In) An Epetra_MultiVector of dimension NumVectors to solve for.
Y	- (Out) An Epetra_MultiVector of dimension NumVectors containing result.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_Operator.

References Epetra_RowMatrix::Solve(), Epetra_RowMatrix::UpperTriangular(), and UseTranspose().

const Epetra_Map& Epetra_CrsMatrix::ColMap ( ) const

inline

Returns the Epetra_Map object that describes the set of column-indices that appear in each processor's locally owned matrix rows.

Note that if the matrix was constructed with only a row-map, then until FillComplete() is called, this method returns a column-map that is a copy of the row-map. That 'initial' column-map is replaced with a computed column-map (that contains the set of column-indices appearing in each processor's local portion of the matrix) when FillComplete() is called.

Precondition

HaveColMap()==true

const Epetra_Map& Epetra_CrsMatrix::DomainMap ( ) const

inline

Returns the Epetra_Map object associated with the domain of this matrix operator.

Precondition

Filled()==true

Epetra_IntSerialDenseVector& Epetra_CrsMatrix::ExpertExtractIndexOffset

(

)

Returns a reference to the Epetra_IntSerialDenseVector used to hold the local IndexOffsets (CRS rowptr)

Warning

This method is intended for experts only, its use may require user code modifications in future versions of Epetra.

Epetra_IntSerialDenseVector& Epetra_CrsMatrix::ExpertExtractIndices

(

)

Returns a reference to the Epetra_IntSerialDenseVector used to hold the local All_Indices (CRS colind)

Warning

This method is intended for experts only, its use may require user code modifications in future versions of Epetra.

double*& Epetra_CrsMatrix::ExpertExtractValues ( )

inline

Returns a reference to the double* used to hold the values array.

Warning

This method is intended for experts only, its use may require user code modifications in future versions of Epetra.

int Epetra_CrsMatrix::ExpertMakeUniqueCrsGraphData

(

)

Makes sure this matrix has a unique CrsGraphData object.

This routine is needed to support the EpetraExt::MatrixMatrix::Multiply and should not be called by users.

Warning

This method is intended for expert developer use only, and should never be called by user code.

int Epetra_CrsMatrix::ExpertStaticFillComplete	(	const Epetra_Map &	DomainMap,
		const Epetra_Map &	RangeMap,
		const Epetra_Import *	Importer = 0,
		const Epetra_Export *	Exporter = 0,
		int	NumMyDiagonals = -1
	)

Performs a FillComplete on an object that aready has filled CRS data.

Performs a lightweight FillComplete on an object that already has filled IndexOffsets, All_Indices and All_Values. This routine is needed to support the EpetraExt::MatrixMatrix::Multiply and should not be called by users.

Warning

Epetra_CrsMatrix will assume ownership of the Importer/Exporter you pass in. You should not deallocate it afterwards.

This method is intended for expert developer use only, and should never be called by user code.

int Epetra_CrsMatrix::ExtractCrsDataPointers ( int *&  IndexOffset, int *&  Indices, double *&  Values_in  ) const

inline

Returns internal data pointers associated with Crs matrix format.

Returns data pointers to facilitate optimized code within external packages.

Parameters

IndexOffset	- (Out) Extracted array of indices into Values[] and Indices[]. Local row k is stored in Values[IndexOffset[k]:IndexOffset[k+1]-1] and Indices[IndexOffset[k]:IndexOffset[k+1]-1].
Values	- (Out) Extracted values for all local rows.
Indices	- (Out) Extracted local column indices for the corresponding values.

Returns

Integer error code, set to 0 if successful. Returns -1 if FillComplete has not been performed or Storage has not been Optimized.

Warning

This method is intended for expert only, its use may require user code modifications in future versions of Epetra.

int Epetra_CrsMatrix::ExtractDiagonalCopy ( Epetra_Vector &  Diagonal ) const

virtual

Returns a copy of the main diagonal in a user-provided vector.

Parameters

Diagonal

- (Out) Extracted main diagonal.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_RowMatrix.

Reimplemented in Epetra_OskiMatrix.

int Epetra_CrsMatrix::ExtractGlobalRowCopy	(	int	GlobalRow,
		int	Length,
		int &	NumEntries,
		double *	Values,
		int *	Indices
	)		const

Returns a copy of the specified global row in user-provided arrays.

\param GlobalRow - (In) Global row to extract.
\param ILength - (In) Length of Values and Indices.
\param NumEntries - (Out) Number of nonzero entries extracted.
\param Values - (Out) Extracted values for this row.
\param Indices - (Out) Extracted global column indices for the corresponding values.

\return Integer error code, set to 0 if successful, non-zero if global row is not owned by calling process

or if the number of entries in this row exceed the Length parameter.

int Epetra_CrsMatrix::ExtractGlobalRowCopy	(	int	GlobalRow,
		int	Length,
		int &	NumEntries,
		double *	Values
	)		const

Returns a copy of the specified global row values in user-provided array.

Parameters

GlobalRow	- (In) Global row to extract.
Length	- (In) Length of Values.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.

Returns

Integer error code, set to 0 if successful.

int Epetra_CrsMatrix::ExtractGlobalRowView	(	int	GlobalRow,
		int &	NumEntries,
		double *&	Values,
		int *&	Indices
	)		const

Returns a view of the specified global row values via pointers to internal data.

Parameters

GlobalRow	- (In) Global row to view.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.
Indices	- (Out) Extracted global column indices for the corresponding values.

Returns

Integer error code, set to 0 if successful. Returns -1 of row not on this processor. Returns -2 if matrix is not in global form (if FillComplete() has already been called).

Precondition

IndicesAreGlobal()==true

int Epetra_CrsMatrix::ExtractGlobalRowView	(	int	GlobalRow,
		int &	NumEntries,
		double *&	Values
	)		const

Returns a view of the specified global row values via pointers to internal data.

Parameters

GlobalRow	- (In) Global row to extract.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.

Returns

Integer error code, set to 0 if successful.

int Epetra_CrsMatrix::ExtractMyRowCopy ( int  MyRow, int  Length, int &  NumEntries, double *  Values, int *  Indices  ) const

virtual

Returns a copy of the specified local row in user-provided arrays.

Parameters

MyRow	- (In) Local row to extract.
Length	- (In) Length of Values and Indices.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.
Indices	- (Out) Extracted local column indices for the corresponding values.

Returns

Integer error code, set to 0 if successful.

Precondition

IndicesAreLocal()==true

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::ExtractMyRowCopy	(	int	MyRow,
		int	Length,
		int &	NumEntries,
		double *	Values
	)		const

Returns a copy of the specified local row values in user-provided array.

Parameters

MyRow	- (In) Local row to extract.
Length	- (In) Length of Values.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.

Returns

Integer error code, set to 0 if successful.

int Epetra_CrsMatrix::ExtractMyRowView	(	int	MyRow,
		int &	NumEntries,
		double *&	Values,
		int *&	Indices
	)		const

Returns a view of the specified local row values via pointers to internal data.

Parameters

MyRow	- (In) Local row to view.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.
Indices	- (Out) Extracted local column indices for the corresponding values.

Returns

Integer error code, set to 0 if successful. Returns -1 of row not on this processor. Returns -2 if matrix is not in local form (if FillComplete() has not been called).

Precondition

IndicesAreLocal()==true

int Epetra_CrsMatrix::ExtractMyRowView	(	int	MyRow,
		int &	NumEntries,
		double *&	Values
	)		const

Returns a view of the specified local row values via pointers to internal data.

Parameters

MyRow	- (In) Local row to extract.
NumEntries	- (Out) Number of nonzero entries extracted.
Values	- (Out) Extracted values for this row.

Returns

Integer error code, set to 0 if successful.

int Epetra_CrsMatrix::GCID ( int  LCID_in ) const

inline

Returns the global column index for give local column index, returns IndexBase-1 if we don't have this local column.

Precondition

HaveColMap()==true (If HaveColMap()==false, returns -1)

int Epetra_CrsMatrix::GlobalMaxNumEntries ( ) const

inline

Returns the maximum number of nonzero entries across all rows on all processors.

Precondition

Filled()==true

bool Epetra_CrsMatrix::HaveColMap ( ) const

inline

Returns true if we have a well-defined ColMap, and returns false otherwise.

Precondition

We have a well-defined ColMap if a) a ColMap was passed in at construction, or b) the MakeColMap function has been called. (Calling either of the FillComplete functions will result in MakeColMap being called.)

int Epetra_CrsMatrix::IndexBase ( ) const

inline

Returns the index base for row and column indices for this graph.

Index base for this map.

virtual int Epetra_CrsMatrix::InsertGlobalValues ( int  GlobalRow, int  NumEntries, const double *  Values, const int *  Indices  )

virtual

Insert a list of elements in a given global row of the matrix.

This method is used to construct a matrix for the first time. It cannot be used if the matrix structure has already been fixed (via a call to FillComplete()). If multiple values are inserted for the same matrix entry, the values are initially stored separately, so memory use will grow as a result. However, when FillComplete is called the values will be summed together and the additional memory will be released.

For example, if the values 2.0, 3.0 and 4.0 are all inserted in Row 1, Column 2, extra storage is used to store each of the three values separately. In this way, the insert process does not require any searching and can be faster. However, when FillComplete() is called, the values will be summed together to equal 9.0 and only a single entry will remain in the matrix for Row 1, Column 2.

Parameters

GlobalRow	- (In) Row number (in global coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Global column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if the allocated length of the row has to be expanded, a positive warning code will be returned.

Warning

This method may not be called once FillComplete() has been called.

Precondition

IndicesAreLocal()==false && IndicesAreContiguous()==false

Reimplemented in Epetra_FECrsMatrix.

virtual int Epetra_CrsMatrix::InsertGlobalValues ( int  GlobalRow, int  NumEntries, double *  Values, int *  Indices  )

virtual

Insert a list of elements in a given global row of the matrix.

This method is used to construct a matrix for the first time. It cannot be used if the matrix structure has already been fixed (via a call to FillComplete()). If multiple values are inserted for the same matrix entry, the values are initially stored separately, so memory use will grow as a result. However, when FillComplete is called the values will be summed together and the additional memory will be released.

For example, if the values 2.0, 3.0 and 4.0 are all inserted in Row 1, Column 2, extra storage is used to store each of the three values separately. In this way, the insert process does not require any searching and can be faster. However, when FillComplete() is called, the values will be summed together to equal 9.0 and only a single entry will remain in the matrix for Row 1, Column 2.

Parameters

GlobalRow	- (In) Row number (in global coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Global column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if the allocated length of the row has to be expanded, a positive warning code will be returned.

Warning

This method may not be called once FillComplete() has been called.

Precondition

IndicesAreLocal()==false && IndicesAreContiguous()==false

Reimplemented in Epetra_FECrsMatrix.

int Epetra_CrsMatrix::InsertMyValues	(	int	MyRow,
		int	NumEntries,
		const double *	Values,
		const int *	Indices
	)

Insert a list of elements in a given local row of the matrix.

Parameters

MyRow	- (In) Row number (in local coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Local column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if the allocated length of the row has to be expanded, a positive warning code will be returned.

Precondition

IndicesAreGlobal()==false && (IndicesAreContiguous()==false || CV_==View)

Postcondition

The given local row of the matrix has been updated as described above.

int Epetra_CrsMatrix::InsertMyValues	(	int	MyRow,
		int	NumEntries,
		double *	Values,
		int *	Indices
	)

Insert a list of elements in a given local row of the matrix.

Parameters

MyRow	- (In) Row number (in local coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Local column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if the allocated length of the row has to be expanded, a positive warning code will be returned.

Precondition

IndicesAreGlobal()==false && (IndicesAreContiguous()==false || CV_==View)

Postcondition

The given local row of the matrix has been updated as described above.

int Epetra_CrsMatrix::InvColMaxs

(

Epetra_Vector &

x

)

const

Computes the max of absolute values of the columns of the Epetra_CrsMatrix, results returned in x.

The vector x will return such that x[j] will contain the inverse of max of the absolute values of the entries in the jth row of the this matrix.

Warning

This method will not work when multiple processors contain partial sums for individual entries.

Parameters

x	- (Out) An Epetra_Vector containing the column maxs of the this matrix.

Warning

When columns are fully replicated on multiple processors, it is assumed that the distribution of x is the same as the columns (ColMap()) of this. When each column of this is uniquely owned, the distribution of x can be that of the ColMap() or the DomainMap().

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

int Epetra_CrsMatrix::InvColSums ( Epetra_Vector &  x ) const

virtual

Computes the inverse of the sum of absolute values of the columns of the Epetra_CrsMatrix, results returned in x.

The vector x will return such that x[j] will contain the inverse of the sum of the absolute values of the entries in the jth column of the this matrix. Using the resulting vector from this function as input to RightScale() will make the one norm of the resulting matrix exactly 1.

Warning

The NormOne() method will not properly calculate the one norm for a matrix that has entries that are replicated on multiple processors. In this case, if the columns are fully replicated, NormOne() will return a value equal to the maximum number of processors that any individual column of the matrix is repliated on.

Parameters

x	- (Out) An Epetra_Vector containing the column sums of the this matrix.

Warning

When columns are fully replicated on multiple processors, it is assumed that the distribution of x is the same as the columns (ColMap()) of this. When multiple processors contain partial sums for entries, the distribution of x is assumed to be the same as the DomainMap() of this. When each column of this is uniquely owned, the distribution of x can be that of the ColMap() or the DomainMap().

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::InvRowMaxs

(

Epetra_Vector &

x

)

const

Computes the inverse of the max of absolute values of the rows of the Epetra_CrsMatrix, results returned in x.

The vector x will return such that x[i] will contain the inverse of max of the absolute values of the entries in the ith row of the this matrix.

Warning

This method will not work when multiple processors contain partial sums for individual entries.

Parameters

x	- (Out) An Epetra_Vector containing the inverse of the row maxs of the this matrix.

Warning

When rows are fully replicated on multiple processors, it is assumed that the distribution of x is the same as the rows (RowMap())of this. When each row of this is uniquely owned, the distribution of x can be that of the RowMap() or the RangeMap().

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

int Epetra_CrsMatrix::InvRowSums ( Epetra_Vector &  x ) const

virtual

Computes the inverse of the sum of absolute values of the rows of the Epetra_CrsMatrix, results returned in x.

The vector x will return such that x[i] will contain the inverse of the sum of the absolute values of the entries in the ith row of the this matrix. Using the resulting vector from this function as input to LeftScale() will make the infinity norm of the resulting matrix exactly 1.

Warning

The NormInf() method will not properly calculate the infinity norm for a matrix that has entries that are replicated on multiple processors. In this case, if the rows are fully replicated, NormInf() will return a value equal to the maximum number of processors that any individual row of the matrix is replicated on.

Parameters

x	- (Out) An Epetra_Vector containing the inverse of the row sums of the this matrix.

Warning

When rows are fully replicated on multiple processors, it is assumed that the distribution of x is the same as the rows (RowMap())of this. When multiple processors contain partial sums for individual entries, the distribution of x is assumed to be the same as the RangeMap() of this. When each row of this is uniquely owned, the distribution of x can be that of the RowMap() or the RangeMap().

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::LCID ( int  GCID_in ) const

inline

Returns the local column index for given global column index, returns -1 if no local column for this global column.

Precondition

HaveColMap()==true (If HaveColMap()==false, returns -1)

int Epetra_CrsMatrix::LeftScale ( const Epetra_Vector &  x )

virtual

Scales the Epetra_CrsMatrix on the left with a Epetra_Vector x.

The this matrix will be scaled such that A(i,j) = x(i)*A(i,j) where i denotes the row number of A and j denotes the column number of A.

Parameters

x	- (In) An Epetra_Vector to scale with.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

The matrix will be scaled as described above.

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::MaxNumEntries ( ) const

inlinevirtual

Returns the maximum number of nonzero entries across all rows on this processor.

Precondition

Filled()==true

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::Multiply	(	bool	TransA,
		const Epetra_Vector &	x,
		Epetra_Vector &	y
	)		const

Returns the result of a Epetra_CrsMatrix multiplied by a Epetra_Vector x in y.

Parameters

TransA	- (In) If true, multiply by the transpose of matrix, otherwise just use matrix.
x	- (In) An Epetra_Vector to multiply by.
y	- (Out) An Epetra_Vector containing result.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Referenced by Apply().

int Epetra_CrsMatrix::Multiply ( bool  TransA, const Epetra_MultiVector &  X, Epetra_MultiVector &  Y  ) const

virtual

Returns the result of a Epetra_CrsMatrix multiplied by a Epetra_MultiVector X in Y.

Parameters

TransA	- (In) If true, multiply by the transpose of matrix, otherwise just use matrix.
X	- (In) An Epetra_MultiVector of dimension NumVectors to multiply with matrix.
Y	- (Out) An Epetra_MultiVector of dimension NumVectorscontaining result.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_RowMatrix.

Reimplemented in Epetra_OskiMatrix.

bool Epetra_CrsMatrix::MyGCID ( int  GCID_in ) const

inline

Returns true if the GCID passed in belongs to the calling processor in this map, otherwise returns false.

Precondition

HaveColMap()==true (If HaveColMap()==false, returns -1)

bool Epetra_CrsMatrix::MyLCID ( int  LCID_in ) const

inline

Returns true if the LRID passed in belongs to the calling processor in this map, otherwise returns false.

Precondition

HaveColMap()==true (If HaveColMap()==false, returns -1)

int Epetra_CrsMatrix::NumMyCols ( ) const

inlinevirtual

Returns the number of entries in the set of column-indices that appear on this processor.

The set of column-indices that appear on this processor is the union of column-indices that appear in all local rows. The size of this set isn't available until FillComplete() has been called.

Precondition

Filled()==true

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::NumMyDiagonals ( ) const

inlinevirtual

Returns the number of local nonzero diagonal entries, based on global row/column index comparisons.

Precondition

Filled()==true

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::NumMyRowEntries ( int  MyRow, int &  NumEntries  ) const

virtual

Return the current number of values stored for the specified local row.

Similar to NumMyEntries() except NumEntries is returned as an argument and error checking is done on the input value MyRow.

Parameters

MyRow	- (In) Local row.
NumEntries	- (Out) Number of nonzero values.

Returns

Integer error code, set to 0 if successful.

Precondition

None.

Postcondition

Unchanged.

Implements Epetra_RowMatrix.

double* Epetra_CrsMatrix::operator[] ( int  Loc )

inline

Inlined bracket operator for fast access to data. (Const and Non-const versions)

No error checking and dangerous for optimization purposes.

Parameters

Loc	- (In) Local row.

Returns

reference to pointer to locally indexed Loc row in matrix.

int Epetra_CrsMatrix::OptimizeStorage

(

)

Make consecutive row index sections contiguous, minimize internal storage used for constructing graph.

After construction and during initialization (when values are being added), the matrix coefficients for each row are managed as separate segments of memory. This method moves the values for all rows into one large contiguous array and eliminates internal storage that is not needed after matrix construction. Calling this method can have a significant impact on memory costs and machine performance.

If this object was constructed in View mode then this method can't make non-contiguous values contiguous and will return a warning code of 1 if the viewed data isn't already contiguous.

Note

A call to this method will also call the OptimizeStorage method for the associated Epetra_CrsGraph object. If the storage for this graph has already been optimized this additional call will have no effect.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true.

If CV=View when the graph was constructed, then this method will be effective if the indices of the graph were already contiguous. In this case, the indices are left untouched and internal storage for the graph is minimized.

Postcondition

StorageOptimized()==true, if successful.

Graph().StorageOptimized()==true, if successful.

int Epetra_CrsMatrix::PutScalar

(

double

ScalarConstant

)

Initialize all values in the matrix with constant value.

Parameters

ScalarConstant

- (In) Value to use.

Returns

Integer error code, set to 0 if successful.

Precondition

None.

Postcondition

All values in this set to ScalarConstant.

const Epetra_Map& Epetra_CrsMatrix::RangeMap ( ) const

inline

Returns the Epetra_Map object associated with the range of this matrix operator.

Precondition

Filled()==true

int Epetra_CrsMatrix::RemoveEmptyProcessesInPlace

(

const Epetra_BlockMap *

NewMap

)

Remove processes owning zero rows from the Maps and their communicator.

Remove processes owning zero rows from the Maps and their communicator.

Warning

This method is ONLY for use by experts.

We make NO promises of backwards compatibility. This method may change or disappear at any time.

Parameters

newMap

[in] This must be the result of calling the removeEmptyProcesses() method on the row Map. If it is not, this method's behavior is undefined. This pointer will be null on excluded processes.

int Epetra_CrsMatrix::ReplaceColMap

(

const Epetra_BlockMap &

newmap

)

Replaces the current ColMap with the user-specified map object.

Replaces the current ColMap with the user-specified map object, but only if no entries have been inserted into the matrix (both IndicesAreLocal() and IndicesAreGlobal() are false) or currentmap->PointSameAs(newmap) is true. This is a collective function. Returns 0 if map is replaced, -1 if not.

Precondition

(IndicesAreLocal()==false && IndicesAreGlobal()==false) || ColMap().PointSameAs(newmap)==true

int Epetra_CrsMatrix::ReplaceDiagonalValues

(

const Epetra_Vector &

Diagonal

)

Replaces diagonal values of the matrix with those in the user-provided vector.

This routine is meant to allow replacement of { existing} diagonal values. If a diagonal value does not exist for a given row, the corresponding value in the input Epetra_Vector will be ignored and the return code will be set to 1.

The Epetra_Map associated with the input Epetra_Vector must be compatible with the RowMap of the matrix.

Parameters

Diagonal

- (In) New values to be placed in the main diagonal.

Returns

Integer error code, set to 0 if successful, set to 1 on the calling processor if one or more diagonal entries not present in matrix.

Precondition

Filled()==true

Postcondition

Diagonal values have been replaced with the values of Diagonal.

int Epetra_CrsMatrix::ReplaceDomainMapAndImporter	(	const Epetra_Map &	NewDomainMap,
		const Epetra_Import *	NewImporter
	)

Replaces the current DomainMap & Importer with the user-specified map object.

Replaces the current DomainMap and Importer with the user-specified map object, but only if the matrix has been FillCompleted, Importer's TargetMap matches the ColMap and Importer's SourceMap matches the DomainMap (assuming the importer isn't null). If an Importer is passed in, Epetra_CrsMatrix will copy it.

Returns 0 if map/importer is replaced, -1 if not.

Precondition

(!NewImporter && ColMap().PointSameAs(NewDomainMap)) || (NewImporter && ColMap().PointSameAs(NewImporter->TargetMap()) && NewDomainMap.PointSameAs(NewImporter->SourceMap()))

virtual int Epetra_CrsMatrix::ReplaceGlobalValues ( int  GlobalRow, int  NumEntries, const double *  Values, const int *  Indices  )

virtual

Replace specified existing values with this list of entries for a given global row of the matrix.

Parameters

GlobalRow	- (In) Row number (in global coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Global column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if a value is not already present for the specified location in the matrix, the input value will be ignored and a positive warning code will be returned.

Precondition

IndicesAreLocal()==false && IndicesAreContiguous()==false

Reimplemented in Epetra_FECrsMatrix.

int Epetra_CrsMatrix::ReplaceMyValues	(	int	MyRow,
		int	NumEntries,
		const double *	Values,
		const int *	Indices
	)

Replace current values with this list of entries for a given local row of the matrix.

Parameters

MyRow	- (In) Row number (in local coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Local column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if a value is not already present for the specified location in the matrix, the input value will be ignored and a positive warning code will be returned.

Precondition

IndicesAreLocal()==true

Postcondition

MyRow contains the given list of Values at the given Indices.

int Epetra_CrsMatrix::ReplaceRowMap

(

const Epetra_BlockMap &

newmap

)

Replaces the current RowMap with the user-specified map object.

Replaces the current RowMap with the user-specified map object, but only if currentmap->PointSameAs(newmap) is true. This is a collective function. Returns 0 if map is replaced, -1 if not.

Precondition

RowMap().PointSameAs(newmap)==true

int Epetra_CrsMatrix::RightScale ( const Epetra_Vector &  x )

virtual

Scales the Epetra_CrsMatrix on the right with a Epetra_Vector x.

The this matrix will be scaled such that A(i,j) = x(j)*A(i,j) where i denotes the global row number of A and j denotes the global column number of A.

Parameters

x	- (In) The Epetra_Vector used for scaling this.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

The matrix will be scaled as described above.

Implements Epetra_RowMatrix.

int Epetra_CrsMatrix::Scale

(

double

ScalarConstant

)

Multiply all values in the matrix by a constant value (in place: A <- ScalarConstant * A).

Parameters

ScalarConstant

- (In) Value to use.

Returns

Integer error code, set to 0 if successful.

Precondition

None.

Postcondition

All values of this have been multiplied by ScalarConstant.

int Epetra_CrsMatrix::SetUseTranspose ( bool  UseTranspose_in )

inlinevirtual

If set true, transpose of this operator will be applied.

This flag allows the transpose of the given operator to be used implicitly. Setting this flag affects only the Apply() and ApplyInverse() methods. If the implementation of this interface does not support transpose use, this method should return a value of -1.

Parameters

UseTranspose

- (In) If true, multiply by the transpose of operator, otherwise just use operator.

Returns

Always returns 0.

Implements Epetra_Operator.

Referenced by Epetra_FastCrsOperator::SetUseTranspose().

int Epetra_CrsMatrix::Solve	(	bool	Upper,
		bool	Trans,
		bool	UnitDiagonal,
		const Epetra_Vector &	x,
		Epetra_Vector &	y
	)		const

Returns the result of a local solve using the Epetra_CrsMatrix on a Epetra_Vector x in y.

This method solves a triangular system of equations asynchronously on each processor.

Parameters

Upper	- (In) If true, solve Uy = x, otherwise solve Ly = x.
Trans	- (In) If true, solve transpose problem.
UnitDiagonal	- (In) If true, assume diagonal is unit (whether it's stored or not).
x	- (In) An Epetra_Vector to solve for.
y	- (Out) An Epetra_Vector containing result.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

int Epetra_CrsMatrix::Solve ( bool  Upper, bool  Trans, bool  UnitDiagonal, const Epetra_MultiVector &  X, Epetra_MultiVector &  Y  ) const

virtual

Returns the result of a local solve using the Epetra_CrsMatrix a Epetra_MultiVector X in Y.

This method solves a triangular system of equations asynchronously on each processor.

Parameters

Upper	- (In) If true, solve Uy = x, otherwise solve Ly = x.
Trans	- (In) If true, solve transpose problem.
UnitDiagonal	- (In) If true, assume diagonal is unit (whether it's stored or not).
X	- (In) An Epetra_MultiVector of dimension NumVectors to solve for.
Y	- (Out) An Epetra_MultiVector of dimension NumVectors containing result.

Returns

Integer error code, set to 0 if successful.

Precondition

Filled()==true

Postcondition

Unchanged.

Implements Epetra_RowMatrix.

Reimplemented in Epetra_OskiMatrix.

int Epetra_CrsMatrix::SortGhostsAssociatedWithEachProcessor ( bool  Flag )

inline

Forces FillComplete() to locally order ghostnodes associated with each remote processor in ascending order.

To be compliant with AztecOO, FillComplete() already locally orders ghostnodes such that information received from processor k has a lower local numbering than information received from processor j if k is less than j. SortGhostsAssociatedWithEachProcessor(True) further forces FillComplete() to locally number all ghostnodes received from processor k in ascending order. That is, the local numbering of b is less than c if the global numbering of b is less than c and if both b and c are owned by the same processor. This is done to be compliant with some limited block features within ML. In particular, some ML features require that a block structure of the matrix be maintained even within the ghost variables. Always returns 0.

virtual int Epetra_CrsMatrix::SumIntoGlobalValues ( int  GlobalRow, int  NumEntries, const double *  Values, const int *  Indices  )

virtual

Add this list of entries to existing values for a given global row of the matrix.

Parameters

GlobalRow	- (In) Row number (in global coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Global column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if a value is not already present for the specified location in the matrix, the input value will be ignored and a positive warning code will be returned.

Precondition

IndicesAreLocal()==false && IndicesAreContiguous()==false

Reimplemented in Epetra_FECrsMatrix.

int Epetra_CrsMatrix::SumIntoMyValues	(	int	MyRow,
		int	NumEntries,
		const double *	Values,
		const int *	Indices
	)

Add this list of entries to existing values for a given local row of the matrix.

Parameters

MyRow	- (In) Row number (in local coordinates) to put elements.
NumEntries	- (In) Number of entries.
Values	- (In) Values to enter.
Indices	- (In) Local column indices corresponding to values.

Returns

Integer error code, set to 0 if successful. Note that if the allocated length of the row has to be expanded, a positive warning code will be returned.

Precondition

IndicesAreLocal()==true

Postcondition

The given Values at the given Indices have been summed into the entries of MyRow.

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The documentation for this class was generated from the following file:

• Epetra_CrsMatrix.h