Xpetra  Version of the Day
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Macros Pages
Xpetra_CrsGraph.hpp
Go to the documentation of this file.
1 // @HEADER
2 //
3 // ***********************************************************************
4 //
5 // Xpetra: A linear algebra interface package
6 // Copyright 2012 Sandia Corporation
7 //
8 // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
9 // the U.S. Government retains certain rights in this software.
10 //
11 // Redistribution and use in source and binary forms, with or without
12 // modification, are permitted provided that the following conditions are
13 // met:
14 //
15 // 1. Redistributions of source code must retain the above copyright
16 // notice, this list of conditions and the following disclaimer.
17 //
18 // 2. Redistributions in binary form must reproduce the above copyright
19 // notice, this list of conditions and the following disclaimer in the
20 // documentation and/or other materials provided with the distribution.
21 //
22 // 3. Neither the name of the Corporation nor the names of the
23 // contributors may be used to endorse or promote products derived from
24 // this software without specific prior written permission.
25 //
26 // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
27 // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
28 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
29 // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
30 // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
31 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
32 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
33 // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
34 // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
35 // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
36 // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
37 //
38 // Questions? Contact
39 // Jonathan Hu (jhu@sandia.gov)
40 // Andrey Prokopenko (aprokop@sandia.gov)
41 // Ray Tuminaro (rstumin@sandia.gov)
42 //
43 // ***********************************************************************
44 //
45 // @HEADER
46 #ifndef XPETRA_CRSGRAPH_HPP
47 #define XPETRA_CRSGRAPH_HPP
48 
49 #include <Teuchos_ParameterList.hpp>
50 
51 #include <Teuchos_Describable.hpp>
52 #include <Tpetra_KokkosCompat_DefaultNode.hpp>
53 #include "Xpetra_ConfigDefs.hpp"
54 #include "Xpetra_DistObject.hpp"
55 #include "Xpetra_Exceptions.hpp"
56 
57 #include "Xpetra_Map.hpp"
58 
59 #ifdef HAVE_XPETRA_TPETRA
60 #include <Kokkos_StaticCrsGraph.hpp>
61 #endif
62 
63 namespace Xpetra {
64 
65 using Teuchos::ParameterList;
66 
67 struct RowInfo {
68  size_t localRow;
69  size_t allocSize;
70  size_t numEntries;
71  size_t offset1D;
72 };
73 
77 };
78 
79 template <class LocalOrdinal,
80  class GlobalOrdinal,
81  class Node = Tpetra::KokkosClassic::DefaultNode::DefaultNodeType>
82 class CrsGraph
83  : /*public RowGraph<>,*/ public DistObject<GlobalOrdinal, LocalOrdinal, GlobalOrdinal, Node> {
84  public:
85  typedef LocalOrdinal local_ordinal_type;
86  typedef GlobalOrdinal global_ordinal_type;
87  typedef Node node_type;
88 
90  //@
91 
93  virtual ~CrsGraph() {}
94 
96 
98 
99 
101  virtual void insertGlobalIndices(GlobalOrdinal globalRow, const ArrayView<const GlobalOrdinal> &indices) = 0;
102 
104  virtual void insertLocalIndices(const LocalOrdinal localRow, const ArrayView<const LocalOrdinal> &indices) = 0;
105 
107  virtual void removeLocalIndices(LocalOrdinal localRow) = 0;
108 
110  virtual void allocateAllIndices(size_t numNonZeros, ArrayRCP<size_t> &rowptr, ArrayRCP<LocalOrdinal> &colind) = 0;
111 
113  virtual void setAllIndices(const ArrayRCP<size_t> &rowptr, const ArrayRCP<LocalOrdinal> &colind) = 0;
114 
116  virtual void getAllIndices(ArrayRCP<const size_t> &rowptr, ArrayRCP<const LocalOrdinal> &colind) const = 0;
117 
119 
121 
122 
124  virtual void fillComplete(const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > &domainMap, const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > &rangeMap, const RCP<ParameterList> &params = null) = 0;
125 
127  virtual void fillComplete(const RCP<ParameterList> &params = null) = 0;
128 
130  virtual void
132  const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > &rangeMap,
133  const RCP<const Import<LocalOrdinal, GlobalOrdinal, Node> > &importer = null,
134  const RCP<const Export<LocalOrdinal, GlobalOrdinal, Node> > &exporter = null,
135  const RCP<Teuchos::ParameterList> &params = null) = 0;
136 
138 
140 
141 
143  virtual RCP<const Comm<int> > getComm() const = 0;
144 
146  virtual RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > getRowMap() const = 0;
147 
149  virtual RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > getColMap() const = 0;
150 
152  virtual RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > getDomainMap() const = 0;
153 
155  virtual RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > getRangeMap() const = 0;
156 
158  virtual RCP<const Import<LocalOrdinal, GlobalOrdinal, Node> > getImporter() const = 0;
159 
161  virtual RCP<const Export<LocalOrdinal, GlobalOrdinal, Node> > getExporter() const = 0;
162 
164  virtual global_size_t getGlobalNumRows() const = 0;
165 
167  virtual global_size_t getGlobalNumCols() const = 0;
168 
170  virtual size_t getLocalNumRows() const = 0;
171 
173  virtual size_t getLocalNumCols() const = 0;
174 
176  virtual GlobalOrdinal getIndexBase() const = 0;
177 
179  virtual global_size_t getGlobalNumEntries() const = 0;
180 
182  virtual size_t getLocalNumEntries() const = 0;
183 
185  virtual size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const = 0;
186 
188  virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const = 0;
189 
191  virtual size_t getNumAllocatedEntriesInGlobalRow(GlobalOrdinal globalRow) const = 0;
192 
194  virtual size_t getNumAllocatedEntriesInLocalRow(LocalOrdinal localRow) const = 0;
195 
197  virtual size_t getGlobalMaxNumRowEntries() const = 0;
198 
200  virtual size_t getLocalMaxNumRowEntries() const = 0;
201 
203  virtual bool hasColMap() const = 0;
204 
206  virtual bool isLocallyIndexed() const = 0;
207 
209  virtual bool isGloballyIndexed() const = 0;
210 
212  virtual bool isFillComplete() const = 0;
213 
215  virtual bool isStorageOptimized() const = 0;
216 
218  virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView<const GlobalOrdinal> &Indices) const = 0;
219 
221  virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView<const LocalOrdinal> &indices) const = 0;
222 
224  virtual void computeGlobalConstants() = 0;
225 
227 
229 
230 #ifdef HAVE_XPETRA_TPETRA
231  typedef typename node_type::execution_space execution_space;
232  typedef typename node_type::device_type device_type;
233  typedef Kokkos::StaticCrsGraph<LocalOrdinal, Kokkos::LayoutLeft, device_type, void, size_t> local_graph_type;
234 
242  virtual typename local_graph_type::HostMirror getLocalGraphHost() const = 0;
243  virtual local_graph_type getLocalGraphDevice() const = 0;
244 
246  virtual void getLocalDiagOffsets(const Kokkos::View<size_t *, device_type, Kokkos::MemoryUnmanaged> &offsets) const = 0;
247 
248 #else
249 #ifdef __GNUC__
250 #warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
251 #endif
252 #endif
253 
255 
257 
258 
260  virtual std::string description() const = 0;
261 
263  virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel = Teuchos::Describable::verbLevel_default) const = 0;
264 
266 
267 }; // CrsGraph class
268 
269 } // namespace Xpetra
270 
271 #define XPETRA_CRSGRAPH_SHORT
272 #endif // XPETRA_CRSGRAPH_HPP
virtual bool hasColMap() const =0
Whether the graph has a column Map.
node_type::device_type device_type
virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices) const =0
Return a const, nonpersisting view of local indices in the given row.
virtual bool isStorageOptimized() const =0
Returns true if storage has been optimized.
Kokkos::StaticCrsGraph< LocalOrdinal, Kokkos::LayoutLeft, device_type, void, size_t > local_graph_type
virtual size_t getLocalNumRows() const =0
Returns the number of graph rows owned on the calling node.
virtual size_t getNumAllocatedEntriesInGlobalRow(GlobalOrdinal globalRow) const =0
Returns the current number of allocated entries for this node in the specified global row ...
virtual RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getColMap() const =0
Returns the Map that describes the column distribution in this graph.
virtual size_t getLocalMaxNumRowEntries() const =0
Maximum number of entries in all rows owned by the calling process.
virtual void insertLocalIndices(const LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &indices)=0
Insert local indices into the graph.
virtual void insertGlobalIndices(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &indices)=0
Insert global indices into the graph.
virtual void expertStaticFillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &importer=null, const RCP< const Export< LocalOrdinal, GlobalOrdinal, Node > > &exporter=null, const RCP< Teuchos::ParameterList > &params=null)=0
Expert version of fillComplete.
virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const =0
Print the object with some verbosity level to an FancyOStream object.
virtual void getLocalDiagOffsets(const Kokkos::View< size_t *, device_type, Kokkos::MemoryUnmanaged > &offsets) const =0
Get offsets of the diagonal entries in the matrix.
virtual void setAllIndices(const ArrayRCP< size_t > &rowptr, const ArrayRCP< LocalOrdinal > &colind)=0
Sets the 1D pointer arrays of the graph.
virtual void allocateAllIndices(size_t numNonZeros, ArrayRCP< size_t > &rowptr, ArrayRCP< LocalOrdinal > &colind)=0
Allocates the 1D pointer arrays of the graph.
virtual size_t getNumAllocatedEntriesInLocalRow(LocalOrdinal localRow) const =0
Returns the current number of allocated entries on this node in the specified local row...
LocalOrdinal local_ordinal_type
virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const =0
Returns the current number of entries on this node in the specified local row.
virtual RCP< const Export< LocalOrdinal, GlobalOrdinal, Node > > getExporter() const =0
Returns the exporter associated with this graph.
virtual size_t getLocalNumEntries() const =0
Returns the local number of entries in the graph.
virtual ~CrsGraph()
Destructor.
GlobalOrdinal global_ordinal_type
virtual bool isLocallyIndexed() const =0
Whether column indices are stored using local indices on the calling process.
virtual global_size_t getGlobalNumCols() const =0
Returns the number of global columns in the graph.
virtual void removeLocalIndices(LocalOrdinal localRow)=0
Remove all graph indices from the specified local row.
virtual local_graph_type::HostMirror getLocalGraphHost() const =0
Get the local graph.
virtual GlobalOrdinal getIndexBase() const =0
Returns the index base for global indices for this graph.
virtual void getAllIndices(ArrayRCP< const size_t > &rowptr, ArrayRCP< const LocalOrdinal > &colind) const =0
Gets the 1D pointer arrays of the graph.
virtual RCP< const Comm< int > > getComm() const =0
Returns the communicator.
virtual global_size_t getGlobalNumEntries() const =0
Returns the global number of entries in the graph.
virtual global_size_t getGlobalNumRows() const =0
Returns the number of global rows in the graph.
virtual RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getDomainMap() const =0
Returns the Map associated with the domain of this graph.
virtual bool isFillComplete() const =0
Whether fillComplete() has been called and the graph is in compute mode.
size_t global_size_t
Global size_t object.
virtual size_t getLocalNumCols() const =0
Returns the number of columns connected to the locally owned rows of this graph.
virtual std::string description() const =0
Return a simple one-line description of this object.
node_type::execution_space execution_space
virtual size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const =0
Returns the current number of entries on this node in the specified global row.
virtual RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > getImporter() const =0
Returns the importer associated with this graph.
virtual size_t getGlobalMaxNumRowEntries() const =0
Maximum number of entries in all rows over all processes.
virtual void computeGlobalConstants()=0
Force the computation of global constants if we don&#39;t have them.
virtual void fillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< ParameterList > &params=null)=0
Signal that data entry is complete, specifying domain and range maps.
virtual local_graph_type getLocalGraphDevice() const =0
virtual RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRangeMap() const =0
Returns the Map associated with the domain of this graph.
virtual bool isGloballyIndexed() const =0
Whether column indices are stored using global indices on the calling process.
virtual RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRowMap() const =0
Returns the Map that describes the row distribution in this graph.
virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &Indices) const =0
Return a const, nonpersisting view of global indices in the given row.