MueLu_StructuredAggregationFactory_kokkos_def.hpp

Go to the documentation of this file.

// @HEADER
//
// ***********************************************************************
//
//        MueLu: A package for multigrid based preconditioning
//                  Copyright 2012 Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact
//                    Jonathan Hu       (jhu@sandia.gov)
//                    Andrey Prokopenko (aprokop@sandia.gov)
//                    Ray Tuminaro      (rstumin@sandia.gov)
//
// ***********************************************************************
//
// @HEADER
#ifndef MUELU_STRUCTUREDAGGREGATIONFACTORY_KOKKOS_DEF_HPP
#define MUELU_STRUCTUREDAGGREGATIONFACTORY_KOKKOS_DEF_HPP

#ifdef HAVE_MUELU_KOKKOS_REFACTOR

// Xpetra includes
#include <Xpetra_Map.hpp>
#include <Xpetra_CrsGraph.hpp>

// MueLu generic includes
#include "MueLu_Level.hpp"
#include "MueLu_MasterList.hpp"
#include "MueLu_Monitor.hpp"
#include "MueLu_Utilities.hpp"

// MueLu specific includes (kokkos version)
#include "MueLu_LWGraph_kokkos.hpp"
#include "MueLu_Aggregates_kokkos.hpp"
#include "MueLu_IndexManager_kokkos.hpp"
#include "MueLu_AggregationStructuredAlgorithm_kokkos.hpp"

#include "MueLu_StructuredAggregationFactory_kokkos_decl.hpp"

namespace MueLu {

  template <class LocalOrdinal, class GlobalOrdinal, class Node>
  StructuredAggregationFactory_kokkos<LocalOrdinal, GlobalOrdinal, Node>::
  StructuredAggregationFactory_kokkos() : bDefinitionPhase_(true) { }

  template <class LocalOrdinal, class GlobalOrdinal, class Node>
  RCP<const ParameterList> StructuredAggregationFactory_kokkos<LocalOrdinal, GlobalOrdinal, Node>::
  GetValidParameterList() const {
    RCP<ParameterList> validParamList = rcp(new ParameterList());

#define SET_VALID_ENTRY(name) validParamList->setEntry(name, MasterList::getEntry(name))
    SET_VALID_ENTRY("aggregation: preserve Dirichlet points");
    SET_VALID_ENTRY("aggregation: allow user-specified singletons");
    SET_VALID_ENTRY("aggregation: error on nodes with no on-rank neighbors");
    SET_VALID_ENTRY("aggregation: phase3 avoid singletons");
#undef  SET_VALID_ENTRY

    // general variables needed in StructuredAggregationFactory
    validParamList->set<std::string>            ("aggregation: output type", "Aggregates",
                                                 "Type of object holding the aggregation data: Aggregtes or CrsGraph");
    validParamList->set<std::string>            ("aggregation: coarsening rate", "{3}",
                                                 "Coarsening rate per spatial dimensions");
    validParamList->set<int>                    ("aggregation: coarsening order", 0,
                                                  "The interpolation order used to construct grid transfer operators based off these aggregates.");

    validParamList->set<RCP<const FactoryBase> >("Graph",                   Teuchos::null,
                                                 "Graph of the matrix after amalgamation but without dropping.");
    validParamList->set<RCP<const FactoryBase> >("DofsPerNode",             Teuchos::null,
                                                 "Number of degrees of freedom per mesh node, provided by the coalsce drop factory.");
    validParamList->set<RCP<const FactoryBase> >("numDimensions",           Teuchos::null,
                                                 "Number of spatial dimension provided by CoordinatesTransferFactory.");
    validParamList->set<RCP<const FactoryBase> >("lNodesPerDim",            Teuchos::null,
                                                 "Number of nodes per spatial dimmension provided by CoordinatesTransferFactory.");

    return validParamList;
  } // GetValidParameterList()

  template <class LocalOrdinal, class GlobalOrdinal, class Node>
  void StructuredAggregationFactory_kokkos<LocalOrdinal, GlobalOrdinal, Node>::
  DeclareInput(Level& currentLevel) const {
    Input(currentLevel, "Graph");
    Input(currentLevel, "DofsPerNode");

    // Request the local number of nodes per dimensions
    if(currentLevel.GetLevelID() == 0) {
      if(currentLevel.IsAvailable("numDimensions", NoFactory::get())) {
        currentLevel.DeclareInput("numDimensions", NoFactory::get(), this);
      } else {
        TEUCHOS_TEST_FOR_EXCEPTION(currentLevel.IsAvailable("numDimensions", NoFactory::get()),
                                   Exceptions::RuntimeError,
                                   "numDimensions was not provided by the user on level0!");
      }
      if(currentLevel.IsAvailable("lNodesPerDim", NoFactory::get())) {
        currentLevel.DeclareInput("lNodesPerDim", NoFactory::get(), this);
      } else {
        TEUCHOS_TEST_FOR_EXCEPTION(currentLevel.IsAvailable("lNodesPerDim", NoFactory::get()),
                                   Exceptions::RuntimeError,
                                   "lNodesPerDim was not provided by the user on level0!");
      }
    } else {
      Input(currentLevel, "lNodesPerDim");
      Input(currentLevel, "numDimensions");
    }
  } // DeclareInput()

  template <class LocalOrdinal, class GlobalOrdinal, class Node>
  void StructuredAggregationFactory_kokkos<LocalOrdinal, GlobalOrdinal, Node>::
  Build(Level &currentLevel) const {
    FactoryMonitor m(*this, "Build", currentLevel);

    RCP<Teuchos::FancyOStream> out;
    if(const char* dbg = std::getenv("MUELU_STRUCTUREDAGGREGATION_DEBUG")) {
      out = Teuchos::fancyOStream(Teuchos::rcpFromRef(std::cout));
      out->setShowAllFrontMatter(false).setShowProcRank(true);
    } else {
      out = Teuchos::getFancyOStream(rcp(new Teuchos::oblackholestream()));
    }

    typedef typename LWGraph_kokkos::local_graph_type::device_type::execution_space execution_space;
    typedef typename LWGraph_kokkos::local_graph_type::device_type::memory_space memory_space;

    *out << "Entering structured aggregation" << std::endl;

    ParameterList pL = GetParameterList();
    bDefinitionPhase_ = false;  // definition phase is finished, now all aggregation algorithm information is fixed

    // General problem informations are gathered from data stored in the problem matix.
    RCP<const LWGraph_kokkos> graph = Get<RCP<LWGraph_kokkos> >(currentLevel, "Graph");
    RCP<const Map> fineMap          = graph->GetDomainMap();
    const int myRank                = fineMap->getComm()->getRank();
    const LO  dofsPerNode           = Get<LO>(currentLevel, "DofsPerNode");

    // Since we want to operate on nodes and not dof, we need to modify the rowMap in order to
    // obtain a nodeMap.
    const int interpolationOrder = pL.get<int>("aggregation: coarsening order");
    std::string outputType = pL.get<std::string>("aggregation: output type");
    const bool outputAggregates = (outputType == "Aggregates" ? true : false);
    Array<LO> lFineNodesPerDir(3);
    int numDimensions;
    if(currentLevel.GetLevelID() == 0) {
      // On level 0, data is provided by applications and has no associated factory.
      lFineNodesPerDir = currentLevel.Get<Array<LO> >("lNodesPerDim", NoFactory::get());
      numDimensions    = currentLevel.Get<int>("numDimensions", NoFactory::get());
    } else {
      // On level > 0, data is provided directly by generating factories.
      lFineNodesPerDir = Get<Array<LO> >(currentLevel, "lNodesPerDim");
      numDimensions    = Get<int>(currentLevel, "numDimensions");
    }


    // First make sure that input parameters are set logically based on dimension
    for(int dim = 0; dim < 3; ++dim) {
      if(dim >= numDimensions) {
        lFineNodesPerDir[dim] = 1;
      }
    }

    // Get the coarsening rate
    std::string coarseningRate = pL.get<std::string>("aggregation: coarsening rate");
    Teuchos::Array<LO> coarseRate;
    try {
      coarseRate = Teuchos::fromStringToArray<LO>(coarseningRate);
    } catch(const Teuchos::InvalidArrayStringRepresentation e) {
      GetOStream(Errors,-1) << " *** \"aggregation: coarsening rate\" must be a string convertible into an array! *** "
                            << std::endl;
      throw e;
    }
    TEUCHOS_TEST_FOR_EXCEPTION((coarseRate.size() > 1) && (coarseRate.size() < numDimensions),
                               Exceptions::RuntimeError,
                               "\"aggregation: coarsening rate\" must have at least as many"
                               " components as the number of spatial dimensions in the problem.");

    // Now that we have extracted info from the level, create the IndexManager
    RCP<IndexManager_kokkos> geoData = rcp(new IndexManager_kokkos(numDimensions,
                                                                   interpolationOrder, myRank,
                                                                   lFineNodesPerDir,
                                                                   coarseRate));

    *out << "The index manager has now been built" << std::endl;
    TEUCHOS_TEST_FOR_EXCEPTION(fineMap->getNodeNumElements()
                               != static_cast<size_t>(geoData->getNumLocalFineNodes()),
                               Exceptions::RuntimeError,
                               "The local number of elements in the graph's map is not equal to "
                               "the number of nodes given by: lNodesPerDim!");

    // Now we are ready for the big loop over the fine node that will assign each
    // node on the fine grid to an aggregate and a processor.
    RCP<AggregationStructuredAlgorithm_kokkos> myStructuredAlgorithm
      = rcp(new AggregationStructuredAlgorithm_kokkos());

    if(interpolationOrder == 0 && outputAggregates){
      RCP<Aggregates_kokkos> aggregates = rcp(new Aggregates_kokkos(graph->GetDomainMap()));
      aggregates->setObjectLabel("ST");
      aggregates->SetIndexManager(geoData);
      aggregates->AggregatesCrossProcessors(false);
      aggregates->SetNumAggregates(geoData->getNumCoarseNodes());

      LO numNonAggregatedNodes = geoData->getNumLocalFineNodes();
      Kokkos::View<unsigned*, memory_space> aggStat("aggStat", numNonAggregatedNodes);
      Kokkos::parallel_for("StructuredAggregation: initialize aggStat",
                           Kokkos::RangePolicy<execution_space>(0, numNonAggregatedNodes),
                           KOKKOS_LAMBDA(const LO nodeIdx) {aggStat(nodeIdx) = READY;});

      myStructuredAlgorithm->BuildAggregates(pL, *graph, *aggregates, aggStat,
                                             numNonAggregatedNodes);

      *out << "numNonAggregatedNodes: " << numNonAggregatedNodes << std::endl;

      TEUCHOS_TEST_FOR_EXCEPTION(numNonAggregatedNodes, Exceptions::RuntimeError,
                                 "MueLu::StructuredAggregationFactory::Build: Leftover nodes found! Error!");
      aggregates->ComputeAggregateSizes(true/*forceRecompute*/);
      GetOStream(Statistics1) << aggregates->description() << std::endl;
      Set(currentLevel, "Aggregates", aggregates);

    } else {
      // Create Coarse Data
      RCP<CrsGraph> myGraph;
      myStructuredAlgorithm->BuildGraph(*graph, geoData, dofsPerNode, myGraph);
      Set(currentLevel, "prolongatorGraph", myGraph);
    }

    Set(currentLevel, "lCoarseNodesPerDim",       geoData->getCoarseNodesPerDirArray());
    Set(currentLevel, "indexManager",             geoData);
    Set(currentLevel, "interpolationOrder",       interpolationOrder);
    Set(currentLevel, "numDimensions",            numDimensions);

  } // Build()

} //namespace MueLu

#endif // HAVE_MUELU_KOKKOS_REFACTOR
#endif /* MUELU_STRUCTUREDAGGREGATIONFACTORY_KOKKOS_DEF_HPP */