Tpetra parallel linear algebra  Version of the Day
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Epetra_TsqrAdaptor.hpp
Go to the documentation of this file.
1 // @HEADER
2 // ***********************************************************************
3 //
4 // Tpetra: Templated Linear Algebra Services Package
5 // Copyright (2008) Sandia Corporation
6 //
7 // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
8 // the U.S. Government retains certain rights in this software.
9 //
10 // Redistribution and use in source and binary forms, with or without
11 // modification, are permitted provided that the following conditions are
12 // met:
13 //
14 // 1. Redistributions of source code must retain the above copyright
15 // notice, this list of conditions and the following disclaimer.
16 //
17 // 2. Redistributions in binary form must reproduce the above copyright
18 // notice, this list of conditions and the following disclaimer in the
19 // documentation and/or other materials provided with the distribution.
20 //
21 // 3. Neither the name of the Corporation nor the names of the
22 // contributors may be used to endorse or promote products derived from
23 // this software without specific prior written permission.
24 //
25 // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
26 // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
27 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
28 // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
29 // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
30 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
31 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
32 // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
33 // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
34 // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
35 // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
36 //
37 // ************************************************************************
38 // @HEADER
39 
40 #ifndef EPETRA_TSQRADAPTOR_HPP
41 #define EPETRA_TSQRADAPTOR_HPP
42 
54 
55 #include "Tpetra_ConfigDefs.hpp"
56 
57 #if defined(HAVE_TPETRA_EPETRA) && defined(HAVE_TPETRA_TSQR)
58 
59 #include "Tsqr_NodeTsqrFactory.hpp" // create intranode TSQR object
60 #include "Tsqr.hpp" // full (internode + intranode) TSQR
61 #include "Tsqr_DistTsqr.hpp" // internode TSQR
62 #include "Epetra_Comm.h"
63 // Subclass of TSQR::MessengerBase, implemented using Teuchos
64 // communicator template helper functions
65 #include "Epetra_TsqrMessenger.hpp"
66 #include "Epetra_MultiVector.h"
67 #include "Teuchos_ParameterListAcceptorDefaultBase.hpp"
68 #include <stdexcept>
69 
70 namespace Epetra {
71 
96  class TsqrAdaptor : public Teuchos::ParameterListAcceptorDefaultBase {
97  public:
98  typedef Epetra_MultiVector MV;
99 
106  typedef double scalar_type;
107 
114  typedef int ordinal_type;
115 
121  using device_type =
122  Kokkos::Device<Kokkos::DefaultHostExecutionSpace,
123  Kokkos::HostSpace>;
124 
133  using dense_matrix_type =
134  Teuchos::SerialDenseMatrix<ordinal_type, scalar_type>;
135 
141  using magnitude_type = double;
142 
143  private:
144  using matview_type = TSQR::MatView<ordinal_type, scalar_type>;
145  using node_tsqr_factory_type =
146  TSQR::NodeTsqrFactory<scalar_type, ordinal_type, device_type>;
147  // Don't need a "typename" here, because there are no template
148  // parameters involved in the type definition.
149  using node_tsqr_type = TSQR::NodeTsqr<ordinal_type, scalar_type>;
150  using dist_tsqr_type = TSQR::DistTsqr<ordinal_type, scalar_type>;
151  using tsqr_type = TSQR::Tsqr<ordinal_type, scalar_type>;
152 
153  public:
160  TsqrAdaptor (const Teuchos::RCP<Teuchos::ParameterList>& plist) :
161  nodeTsqr_ (node_tsqr_factory_type::getNodeTsqr ()),
162  distTsqr_ (new dist_tsqr_type),
163  tsqr_ (new tsqr_type (nodeTsqr_, distTsqr_)),
164  ready_ (false)
165  {
166  setParameterList (plist);
167  }
168 
170  TsqrAdaptor () :
171  nodeTsqr_ (node_tsqr_factory_type::getNodeTsqr ()),
172  distTsqr_ (new dist_tsqr_type),
173  tsqr_ (new tsqr_type (nodeTsqr_, distTsqr_)),
174  ready_ (false)
175  {
176  setParameterList (Teuchos::null);
177  }
178 
179  Teuchos::RCP<const Teuchos::ParameterList>
180  getValidParameters () const
181  {
182  using Teuchos::RCP;
183  using Teuchos::rcp;
184  using Teuchos::ParameterList;
185  using Teuchos::parameterList;
186 
187  if (defaultParams_.is_null()) {
188  RCP<ParameterList> params = parameterList ("TSQR implementation");
189  params->set ("NodeTsqr", *(nodeTsqr_->getValidParameters ()));
190  params->set ("DistTsqr", *(distTsqr_->getValidParameters ()));
191  defaultParams_ = params;
192  }
193  return defaultParams_;
194  }
195 
196  void
197  setParameterList (const Teuchos::RCP<Teuchos::ParameterList>& plist)
198  {
199  using Teuchos::ParameterList;
200  using Teuchos::parameterList;
201  using Teuchos::RCP;
202  using Teuchos::sublist;
203 
204  RCP<ParameterList> params = plist.is_null() ?
205  parameterList (*getValidParameters ()) : plist;
206  nodeTsqr_->setParameterList (sublist (params, "NodeTsqr"));
207  distTsqr_->setParameterList (sublist (params, "DistTsqr"));
208 
209  this->setMyParamList (params);
210  }
211 
233  void
234  factorExplicit (MV& A,
235  MV& Q,
236  dense_matrix_type& R,
237  const bool forceNonnegativeDiagonal=false)
238  {
239  prepareTsqr (Q); // Finish initializing TSQR.
240 
241  scalar_type* const A_ptr = A.Values ();
242  scalar_type* const Q_ptr = Q.Values ();
243  scalar_type* const R_ptr = R.values ();
244  const ordinal_type numRows = A.MyLength ();
245  const ordinal_type numCols = A.NumVectors ();
246  const ordinal_type lda = A.Stride ();
247  const ordinal_type ldq = Q.Stride ();
248  const ordinal_type ldr = R.stride ();
249 
250  const bool contiguousCacheBlocks = false;
251  tsqr_->factorExplicitRaw (numRows, numCols, A_ptr, lda,
252  Q_ptr, ldq, R_ptr, ldr,
253  contiguousCacheBlocks,
254  forceNonnegativeDiagonal);
255  }
256 
287  int
288  revealRank (MV& Q,
289  dense_matrix_type& R,
290  const magnitude_type& tol)
291  {
292  TEUCHOS_TEST_FOR_EXCEPTION
293  (! Q.ConstantStride (), std::invalid_argument, "TsqrAdaptor::"
294  "revealRank: Input MultiVector Q must have constant stride.");
295  prepareTsqr (Q); // Finish initializing TSQR.
296  // FIXME (mfh 25 Oct 2010) Check Epetra_Comm object in Q to make
297  // sure it is the same communicator as the one we are using in
298  // our dist_tsqr_type implementation.
299  return tsqr_->revealRankRaw (Q.MyLength (), Q.NumVectors (),
300  Q.Values (), Q.Stride (),
301  R.values (), R.stride (), tol, false);
302  }
303 
304  private:
306  Teuchos::RCP<node_tsqr_type> nodeTsqr_;
307 
309  Teuchos::RCP<dist_tsqr_type> distTsqr_;
310 
312  Teuchos::RCP<tsqr_type> tsqr_;
313 
315  mutable Teuchos::RCP<const Teuchos::ParameterList> defaultParams_;
316 
318  bool ready_;
319 
338  void
339  prepareTsqr (const MV& mv)
340  {
341  if (! ready_) {
342  prepareDistTsqr (mv);
343  ready_ = true;
344  }
345  }
346 
353  void
354  prepareDistTsqr (const MV& mv)
355  {
356  using Teuchos::RCP;
357  using Teuchos::rcp;
358  using TSQR::Epetra::makeTsqrMessenger;
359  typedef TSQR::MessengerBase<scalar_type> base_mess_type;
360 
361  // If mv falls out of scope, its Epetra_Comm may become invalid.
362  // Thus, we clone the input Epetra_Comm, so that the messenger
363  // owns the object.
364  RCP<const Epetra_Comm> comm = rcp (mv.Comm().Clone());
365  RCP<base_mess_type> messBase = makeTsqrMessenger<scalar_type> (comm);
366  distTsqr_->init (messBase);
367  }
368  };
369 
370 } // namespace Epetra
371 
372 #endif // defined(HAVE_TPETRA_EPETRA) && defined(HAVE_TPETRA_TSQR)
373 
374 #endif // EPETRA_TSQRADAPTOR_HPP
375 
Function for wrapping Epetra_Comm in a communicator wrapper that TSQR can use.